RNA–Protein interactions for RNA: ENST00000512372.5

NR1I3-232, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-232ENST00000512372 AP4S1Q9Y587 144 aa8.54□□□□□ -1.04
NR1I3-232ENST00000512372 PCDHGA1Q9Y5H4 931 aa8.54□□□□□ -1.04
NR1I3-232ENST00000512372 A0A0A6YYC8 382 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-232ENST00000512372 H3BNX3 289 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 I3L1I5 382 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-232ENST00000512372 CHST10O43529 356 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 HCRTR1O43613 425 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 RDH16O75452 317 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 ERAL1O75616 437 aaKnown RBP8.53□□□□□ -1.04
NR1I3-232ENST00000512372 CREG1O75629 220 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 PDE9AO76083 593 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 B3GALT4O96024 378 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 CAPNS1P04632 268 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 GUSBP08236 651 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 RAP2AP10114 183 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 FGF5P12034 268 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 KDELR2P33947 212 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 GPC1P35052 558 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 RORAP35398 523 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 SOAT1P35610 550 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 XKP51811 444 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 DSTNP60981 165 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 CCL7P80098 99 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 PLIN5Q00G26 463 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 E2F1Q01094 437 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 EEF1A2Q05639 463 aaKnown RBP8.53□□□□□ -1.04
NR1I3-232ENST00000512372 HSPB3Q12988 150 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 GK3PQ14409 553 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 ADRM1Q16186 407 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 CSRP2Q16527 193 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 PRSS53Q2L4Q9 553 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 DEFB110Q30KQ9 67 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 SPDYE7PQ495Y7 208 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.53□□□□□ -1.04
NR1I3-232ENST00000512372 FAM98BQ52LJ0 330 aaKnown RBP8.53□□□□□ -1.04
NR1I3-232ENST00000512372 AP1ARQ63HQ0 302 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 C18orf63Q68DL7 685 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 ZNF574Q6ZN55 896 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-232ENST00000512372 QSOX2Q6ZRP7 698 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 PATL1Q86TB9 770 aaKnown RBP8.53□□□□□ -1.04
NR1I3-232ENST00000512372 PACS2Q86VP3 889 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 IFNEQ86WN2 208 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 ADGRG5Q8IZF4 528 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 ST13P4Q8IZP2 240 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-232ENST00000512372 MMP21Q8N119 569 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 AGBL5Q8NDL9 886 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 HIPK4Q8NE63 616 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 OR1L3Q8NH93 324 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 RASSF5Q8WWW0 418 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 CTHRC1Q96CG8 243 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 ELP4Q96EB1 424 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 LRFN5Q96NI6 719 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 MS4A4EQ96PG1 132 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 ASPSCR1Q9BZE9 553 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 TGIF2Q9GZN2 237 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 MKKSQ9NPJ1 570 aaPredicted RBP8.53□□□□□ -1.04
NR1I3-232ENST00000512372 TMEM9BQ9NQ34 198 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 FSCN3Q9NQT6 498 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 ZCCHC3Q9NUD5 404 aaKnown RBP8.53□□□□□ -1.04
NR1I3-232ENST00000512372 C14orf105Q9NVL8 296 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 GPATCH2Q9NW75 528 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 CALML5Q9NZT1 146 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 EGFL7Q9UHF1 273 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 CNOT11Q9UKZ1 510 aaKnown RBP8.53□□□□□ -1.04
NR1I3-232ENST00000512372 LIPT1Q9Y234 373 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 ANGPT4Q9Y264 503 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 R4GN57 208 aa8.53□□□□□ -1.04
NR1I3-232ENST00000512372 SNRNP200O75643 2136 aaKnown RBP8.53□□□□□ -1.04
NR1I3-232ENST00000512372 MDC1Q14676 2089 aaKnown RBP8.52□□□□□ -1.05
NR1I3-232ENST00000512372 TTC28Q96AY4 2481 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 IGLV3-12A0A075B6K2 115 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 B4E171 279 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 H0YJX3 145 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 SGK494L7N484 410 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 PCDH17O14917 1159 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 DPM1O60762 260 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 COQ9O75208 318 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 AK1P00568 194 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 STATHP02808 62 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 CD59P13987 128 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 FOLR1P15328 257 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 VHLP40337 213 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 TSPAN7P41732 249 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 CRATP43155 626 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 MAGEA2P43356 314 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 PRIM2P49643 509 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 CDK9P50750 372 aaKnown RBP8.52□□□□□ -1.05
NR1I3-232ENST00000512372 PCBP3P57721 371 aaKnown RBP8.52□□□□□ -1.05
NR1I3-232ENST00000512372 PSPHP78330 225 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 SHC2P98077 582 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 FOLH1Q04609 750 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 MAP4K2Q12851 820 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 TP53BP2Q13625 1128 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 MYBPC3Q14896 1274 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 GPR19Q15760 415 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 LPAL2Q16609 132 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 CRB2Q5IJ48 1285 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.52□□□□□ -1.05
NR1I3-232ENST00000512372 REEP3Q6NUK4 255 aa8.52□□□□□ -1.05
NR1I3-232ENST00000512372 EIF3MQ7L2H7 374 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms