RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ART5Q96L15 291 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 TSNARE1Q96NA8 513 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 CSF3RQ99062 836 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 MED18Q9BUE0 208 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 REXO4Q9GZR2 422 aaKnown RBP10.55□□□□□ -0.72
RNF4-216ENST00000511859 YAE1D1Q9NRH1 226 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 PACSIN3Q9UKS6 424 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 SVEP1Q4LDE5 3571 aa10.55□□□□□ -0.72
RNF4-216ENST00000511859 CAPN14A8MX76 684 aa10.54□□□□□ -0.72
RNF4-216ENST00000511859 RNF223E7ERA6 249 aa10.54□□□□□ -0.72
RNF4-216ENST00000511859 LDB3O75112 727 aa10.54□□□□□ -0.72
RNF4-216ENST00000511859 GUCA1CO95843 209 aa10.54□□□□□ -0.72
RNF4-216ENST00000511859 IGKV3-11P04433 115 aa10.54□□□□□ -0.72
RNF4-216ENST00000511859 FAM157CP0CG43 387 aa10.54□□□□□ -0.72
RNF4-216ENST00000511859 HNRNPH1P31943 449 aaKnown RBP10.54□□□□□ -0.72
RNF4-216ENST00000511859 GCKP35557 465 aa10.54□□□□□ -0.72
RNF4-216ENST00000511859 SLC1A2P43004 574 aa10.54□□□□□ -0.72
RNF4-216ENST00000511859 PLA2G16P53816 162 aa10.54□□□□□ -0.72
RNF4-216ENST00000511859 TOMM20Q15388 145 aa10.54□□□□□ -0.72
RNF4-216ENST00000511859 PAQR3Q6TCH7 311 aa10.54□□□□□ -0.72
RNF4-216ENST00000511859 ADGRE4PQ86SQ3 457 aa10.54□□□□□ -0.72
RNF4-216ENST00000511859 CAND1Q86VP6 1230 aaKnown RBP10.54□□□□□ -0.72
RNF4-216ENST00000511859 THOC6Q86W42 341 aaKnown RBP10.54□□□□□ -0.72
RNF4-216ENST00000511859 KIF18AQ8NI77 898 aa10.54□□□□□ -0.72
RNF4-216ENST00000511859 ANKRD7Q92527 254 aa10.54□□□□□ -0.72
RNF4-216ENST00000511859 RBM18Q96H35 190 aaKnown RBP10.54□□□□□ -0.72
RNF4-216ENST00000511859 GNRHR2Q96P88 292 aa10.54□□□□□ -0.72
RNF4-216ENST00000511859 NAP1L3Q99457 506 aaPredicted RBP10.54□□□□□ -0.72
RNF4-216ENST00000511859 REG4Q9BYZ8 158 aa10.54□□□□□ -0.72
RNF4-216ENST00000511859 KLHL28Q9NXS3 571 aa10.54□□□□□ -0.72
RNF4-216ENST00000511859 FBXO5Q9UKT4 447 aa10.54□□□□□ -0.72
RNF4-216ENST00000511859 SLC22A14Q9Y267 594 aa10.54□□□□□ -0.72
RNF4-216ENST00000511859 A0A087X1B8 175 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 SNPHO15079 494 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 CLEC3AO75596 197 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 F7P08709 466 aaPredicted RBP10.53□□□□□ -0.72
RNF4-216ENST00000511859 ENO2P09104 434 aaPredicted RBP10.53□□□□□ -0.72
RNF4-216ENST00000511859 CPOXP36551 454 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 CD79BP40259 229 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 PAFAH1B1P43034 410 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 STT3AP46977 705 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 MASP1P48740 699 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 NAGLUP54802 743 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 IL2P60568 153 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 TIAL1Q01085 375 aaKnown RBP eCLIP10.53□□□□□ -0.72
RNF4-216ENST00000511859 TGM3Q08188 693 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 CLEC12BQ2HXU8 276 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 ADPRMQ3LIE5 342 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 EIPR1Q53HC9 387 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 DCST1Q5T197 706 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 TTC27Q6P3X3 843 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 ABHD17CQ6PCB6 329 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 TMIGD1Q6UXZ0 262 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 SLC29A4Q7RTT9 530 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 BTLAQ7Z6A9 289 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 MILR1Q7Z6M3 343 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 KLHL7Q8IXQ5 586 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 TAGAPQ8N103 731 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 MAPK1IP1LQ8NDC0 245 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 CCT6BQ92526 530 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 MAGOHBQ96A72 148 aaKnown RBP10.53□□□□□ -0.72
RNF4-216ENST00000511859 LINGO1Q96FE5 620 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 MARK4Q96L34 752 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 RILPQ96NA2 401 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 DGAT2Q96PD7 388 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 TUBA1CQ9BQE3 449 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 ANGPTL4Q9BY76 406 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 PITHD1Q9GZP4 211 aaPredicted RBP10.53□□□□□ -0.72
RNF4-216ENST00000511859 COPS7BQ9H9Q2 264 aaPredicted RBP10.53□□□□□ -0.72
RNF4-216ENST00000511859 LYRM4Q9HD34 91 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 ELOVL5Q9NYP7 299 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 C15orf41Q9Y2V0 281 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 SPACA6W5XKT8 324 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 ALPK2Q86TB3 2170 aa10.53□□□□□ -0.72
RNF4-216ENST00000511859 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 IQANK1A0A1B0GTG1 560 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 ZCWPW2A0A1B0GU75 182 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 ANKDD1BA6NHY2 528 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 SDR42E2A6NKP2 422 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 A8MV72 311 aaPredicted RBP10.52□□□□□ -0.72
RNF4-216ENST00000511859 WIPF1O43516 503 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 ZNF500O60304 480 aaPredicted RBP10.52□□□□□ -0.72
RNF4-216ENST00000511859 CDH16O75309 829 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 TNFSF13O75888 250 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 CRHP06850 196 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 C1GALT1C1LP0DN25 315 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 GNAZP19086 355 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 CERS1P27544 350 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 IDUAP35475 653 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 SOX18P35713 384 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 TERF1P54274 439 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 NR1H2P55055 460 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 RPP38P78345 283 aaKnown RBP10.52□□□□□ -0.72
RNF4-216ENST00000511859 C2orf54Q08AI8 447 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 RPS6KA2Q15349 733 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 CCNG2Q16589 344 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 C10orf62Q5T681 223 aaPredicted RBP10.52□□□□□ -0.72
RNF4-216ENST00000511859 FNDC7Q5VTL7 733 aa10.52□□□□□ -0.72
RNF4-216ENST00000511859 DRICH1Q6PGQ1 229 aaPredicted RBP10.52□□□□□ -0.72
RNF4-216ENST00000511859 ENPP6Q6UWR7 440 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms