RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 ERVK-8P63133 956 aa12.07□□□□□ -0.48
POLR2J3-216ENST00000511773 PLIN5Q00G26 463 aa12.07□□□□□ -0.48
POLR2J3-216ENST00000511773 SRYQ05066 204 aa12.07□□□□□ -0.48
POLR2J3-216ENST00000511773 ACKR1Q16570 336 aa12.07□□□□□ -0.48
POLR2J3-216ENST00000511773 NTRK2Q16620 822 aa12.07□□□□□ -0.48
POLR2J3-216ENST00000511773 TBCELQ5QJ74 424 aa12.07□□□□□ -0.48
POLR2J3-216ENST00000511773 TTC27Q6P3X3 843 aa12.07□□□□□ -0.48
POLR2J3-216ENST00000511773 RNF111Q6ZNA4 994 aa12.07□□□□□ -0.48
POLR2J3-216ENST00000511773 FRA10AC1Q70Z53 315 aa12.07□□□□□ -0.48
POLR2J3-216ENST00000511773 UBE3DQ7Z6J8 389 aa12.07□□□□□ -0.48
POLR2J3-216ENST00000511773 ACOT4Q8N9L9 421 aa12.07□□□□□ -0.48
POLR2J3-216ENST00000511773 FBXL20Q96IG2 436 aa12.07□□□□□ -0.48
POLR2J3-216ENST00000511773 ART5Q96L15 291 aa12.07□□□□□ -0.48
POLR2J3-216ENST00000511773 TUBA1CQ9BQE3 449 aa12.07□□□□□ -0.48
POLR2J3-216ENST00000511773 SFXN3Q9BWM7 321 aa12.07□□□□□ -0.48
POLR2J3-216ENST00000511773 ERVK-6Q9BXR3 956 aa12.07□□□□□ -0.48
POLR2J3-216ENST00000511773 UBQLN3Q9H347 655 aa12.07□□□□□ -0.48
POLR2J3-216ENST00000511773 TEX10Q9NXF1 929 aaPredicted RBP12.07□□□□□ -0.48
POLR2J3-216ENST00000511773 KLHL28Q9NXS3 571 aa12.07□□□□□ -0.48
POLR2J3-216ENST00000511773 ERVK-19Q9WJR5 959 aa12.07□□□□□ -0.48
POLR2J3-216ENST00000511773 C15orf41Q9Y2V0 281 aa12.07□□□□□ -0.48
POLR2J3-216ENST00000511773 VWA7Q9Y334 891 aa12.07□□□□□ -0.48
POLR2J3-216ENST00000511773 IQANK1A0A1B0GTG1 560 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 DEFB108AA8MXU0 73 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 H0Y3Z8 333 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 TP53I11O14683 189 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 PRKRAO75569 313 aaKnown RBP12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 ATP5A1P25705 553 aaKnown RBP12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 SLC6A12P48065 614 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 HNMTP50135 292 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 NAGLUP54802 743 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 ZNF267Q14586 743 aaPredicted RBP12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 ZNF460Q14592 562 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 RPS6KA2Q15349 733 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 TSNQ15631 228 aaKnown RBP12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 FBXO48Q5FWF7 155 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 NHSL2Q5HYW2 709 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 FNDC7Q5VTL7 733 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 FAM45BPQ6NSW5 357 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 HMBOX1Q6NT76 420 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 YRDCQ86U90 279 aaKnown RBP12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 PACS2Q86VP3 889 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 MED12LQ86YW9 2145 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 CNTN4Q8IWV2 1026 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 ZNF441Q8N8Z8 693 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 SNX31Q8N9S9 440 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 PPP1R14CQ8TAE6 165 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 FAM45AQ8TCE6 357 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 RBM18Q96H35 190 aaKnown RBP12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 KRT12Q99456 494 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 PIGQQ9BRB3 760 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 NT5DC2Q9H857 520 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 ZNF490Q9ULM2 529 aaPredicted RBP12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 OARD1Q9Y530 152 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 CUBNO60494 3623 aa12.06□□□□□ -0.48
POLR2J3-216ENST00000511773 HEATR5AQ86XA9 2040 aa12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 USF3Q68DE3 2245 aa12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 SAP18O00422 153 aaKnown RBP12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 GNB5O14775 395 aa12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 CTIFO43310 598 aaKnown RBP12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 OR10H2O60403 315 aa12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 SNX4O95219 450 aa12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 ZNF37AP17032 561 aaPredicted RBP12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 HIST1H1TP22492 207 aaPredicted RBP12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 SSR2P43308 183 aa12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 PTH2RP49190 550 aa12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 DIO3P55073 304 aa12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 IGLV3-21P80748 117 aaPredicted RBP12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 EBPQ15125 230 aaKnown RBP12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 TAGAPQ8N103 731 aa12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 FAM83FQ8NEG4 500 aaPredicted RBP12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 SPPL2AQ8TCT8 520 aa12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 ZPLD1Q8TCW7 415 aa12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 RHBDF1Q96CC6 855 aa12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 PDLIM5Q96HC4 596 aaKnown RBP12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 WFIKKN1Q96NZ8 548 aa12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 TM9SF2Q99805 663 aa12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 MED18Q9BUE0 208 aa12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 SORBS1Q9BX66 1292 aaKnown RBP12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 ROGDIQ9GZN7 287 aa12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 PITHD1Q9GZP4 211 aaPredicted RBP12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 PIGMQ9H3S5 423 aa12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 WIF1Q9Y5W5 379 aa12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 EXPH5Q8NEV8 1989 aa12.05□□□□□ -0.48
POLR2J3-216ENST00000511773 ANKRD33BA6NCL7 494 aa12.04□□□□□ -0.48
POLR2J3-216ENST00000511773 PRAMEF4O60810 478 aa12.04□□□□□ -0.48
POLR2J3-216ENST00000511773 SMNDC1O75940 238 aaKnown RBP eCLIP12.04□□□□□ -0.48
POLR2J3-216ENST00000511773 RCBTB2O95199 551 aa12.04□□□□□ -0.48
POLR2J3-216ENST00000511773 ALOX15P16050 662 aaPredicted RBP12.04□□□□□ -0.48
POLR2J3-216ENST00000511773 CD22P20273 847 aa12.04□□□□□ -0.48
POLR2J3-216ENST00000511773 NR1H2P55055 460 aa12.04□□□□□ -0.48
POLR2J3-216ENST00000511773 SLC37A1P57057 533 aa12.04□□□□□ -0.48
POLR2J3-216ENST00000511773 CDKL1Q00532 357 aa12.04□□□□□ -0.48
POLR2J3-216ENST00000511773 DMTNQ08495 405 aa12.04□□□□□ -0.48
POLR2J3-216ENST00000511773 FAM27E3Q08E93 113 aa12.04□□□□□ -0.48
POLR2J3-216ENST00000511773 DOC2AQ14183 400 aa12.04□□□□□ -0.48
POLR2J3-216ENST00000511773 AP5B1Q2VPB7 878 aa12.04□□□□□ -0.48
POLR2J3-216ENST00000511773 KBTBD12Q3ZCT8 623 aa12.04□□□□□ -0.48
POLR2J3-216ENST00000511773 SPANXN3Q5MJ09 141 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms