RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 AFF1P51825 1210 aaKnown RBP6.98□□□□□ -1.29
CPNE4-208ENST00000511604 CDKN2DP55273 166 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 STARD6P59095 220 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 SLC6A3Q01959 620 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 FABP9Q0Z7S8 132 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 SMAD4Q13485 552 aaKnown RBP6.98□□□□□ -1.29
CPNE4-208ENST00000511604 PWP1Q13610 501 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 HLXQ14774 488 aaPredicted RBP6.98□□□□□ -1.29
CPNE4-208ENST00000511604 SYTL3Q4VX76 610 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 SPIN4Q56A73 249 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 PCID2Q5JVF3 399 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 MSANTD2Q6P1R3 559 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 FAHD1Q6P587 224 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 CRTC1Q6UUV9 634 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 REC114Q7Z4M0 266 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 FAM126BQ8IXS8 530 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 PROKR1Q8TCW9 393 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 TADA1Q96BN2 335 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 KCNC2Q96PR1 638 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 HHIPQ96QV1 700 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 ZPBPQ9BS86 351 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 C11orf84Q9BUA3 381 aaPredicted RBP6.98□□□□□ -1.29
CPNE4-208ENST00000511604 THUMPD3Q9BV44 507 aaKnown RBP6.98□□□□□ -1.29
CPNE4-208ENST00000511604 GABARAPL3Q9BY60 117 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 BCO2Q9BYV7 579 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 ABCG5Q9H222 651 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 FN3KQ9H479 309 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 ZIM2Q9NZV7 527 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 PPP4R1LQ9P1A2 415 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 ZMIZ1Q9ULJ6 1067 aa6.98□□□□□ -1.29
CPNE4-208ENST00000511604 CFAP20Q9Y6A4 193 aaKnown RBP6.98□□□□□ -1.29
CPNE4-208ENST00000511604 A0A1B0GW55 424 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 OR2W5A6NFC9 320 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 OR51F1A6NGY5 319 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 LRRTM2O43300 516 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 SEMA7AO75326 666 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 PRR35P0CG20 571 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 DUX4L2P0CJ85 424 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 DUX4L3P0CJ86 424 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 DUX4L4P0CJ87 422 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 DUX4L5P0CJ88 424 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 DUX4L6P0CJ89 424 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 DUX4L7P0CJ90 424 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 GABRA1P14867 456 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 IDH2P48735 452 aaKnown RBP6.97□□□□□ -1.29
CPNE4-208ENST00000511604 EVX1P49640 407 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 RBP2P50120 134 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 SUOXP51687 545 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 CDH4P55283 916 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 HNRNPKP61978 463 aaKnown RBP eCLIP6.97□□□□□ -1.29
CPNE4-208ENST00000511604 GUCA2BQ16661 112 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 ST3GAL2Q16842 350 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 LBHQ53QV2 105 aaPredicted RBP6.97□□□□□ -1.29
CPNE4-208ENST00000511604 ZNF667Q5HYK9 610 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 ZNF852Q6ZMS4 543 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 ZNF730Q6ZMV8 503 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 ASB18Q6ZVZ8 466 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 FGD2Q7Z6J4 655 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 CTU1Q7Z7A3 348 aaKnown RBP6.97□□□□□ -1.29
CPNE4-208ENST00000511604 ACOT1Q86TX2 421 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 ISCA2Q86U28 154 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 TGIF2LXQ8IUE1 241 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 ZNF511Q8NB15 262 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 CHST14Q8NCH0 376 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 BEST4Q8NFU0 473 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 THAP6Q8TBB0 222 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 TMEM163Q8TC26 289 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 NETO1Q8TDF5 533 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 KAT2AQ92830 837 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 MS4A4EQ96PG1 132 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 TMEM209Q96SK2 561 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 MRPL45Q9BRJ2 306 aaKnown RBP6.97□□□□□ -1.29
CPNE4-208ENST00000511604 C2orf88Q9BSF0 95 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 ADAT1Q9BUB4 502 aaKnown RBP6.97□□□□□ -1.29
CPNE4-208ENST00000511604 EDEM2Q9BV94 578 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 GGACTQ9BVM4 153 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 HDHD2Q9H0R4 259 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 RIMS4Q9H426 269 aaPredicted RBP6.97□□□□□ -1.29
CPNE4-208ENST00000511604 SYNDIG1Q9H7V2 258 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 SEMA4BQ9NPR2 832 aaPredicted RBP6.97□□□□□ -1.29
CPNE4-208ENST00000511604 TXNL4BQ9NX01 149 aaKnown RBP6.97□□□□□ -1.29
CPNE4-208ENST00000511604 NDUFB11Q9NX14 153 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 MS4A12Q9NXJ0 267 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 TAS2R3Q9NYW6 316 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 DUX4Q9UBX2 424 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 PLEKHA6Q9Y2H5 1048 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 MED16Q9Y2X0 877 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 PLEKHM1Q9Y4G2 1056 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 BRCA1P38398 1863 aaKnown RBP6.97□□□□□ -1.29
CPNE4-208ENST00000511604 TRIP11Q15643 1979 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 OR6C74A6NCV1 312 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 ARNTLO00327 626 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 RTCAO00442 366 aaKnown RBP6.97□□□□□ -1.29
CPNE4-208ENST00000511604 OIP5O43482 229 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 MSCO60682 206 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 C22orf31O95567 290 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 ALPIP09923 528 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 G6PDP11413 515 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 FOLR2P14207 255 aa6.97□□□□□ -1.29
CPNE4-208ENST00000511604 NPR2P20594 1047 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms