RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 KRT12Q99456 494 aa20.98■□□□□ 0.95
SMAD5-207ENST00000511116 PELOQ9BRX2 385 aaKnown RBP20.98■□□□□ 0.95
SMAD5-207ENST00000511116 WWTR1Q9GZV5 400 aa20.98■□□□□ 0.95
SMAD5-207ENST00000511116 NUDT4Q9NZJ9 180 aa20.98■□□□□ 0.95
SMAD5-207ENST00000511116 RNF112Q9ULX5 631 aa20.98■□□□□ 0.95
SMAD5-207ENST00000511116 OR6C76A6NM76 312 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 EFCAB8A8MWE9 144 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 CCDC188H7C350 402 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 K7EPI3 171 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 SAP18O00422 153 aaKnown RBP20.97■□□□□ 0.95
SMAD5-207ENST00000511116 SH3BGRLO75368 114 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 TIMP3P35625 211 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 GP5P40197 560 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 HERVK_113P63132 956 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 ERVK-8P63133 956 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 CEBPEQ15744 281 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 TBCELQ5QJ74 424 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 C18orf63Q68DL7 685 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 CDC20BQ86Y33 519 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 FAM13CQ8NE31 585 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 HUS1BQ8NHY5 278 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 STAG3L4Q8TBR4 150 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 CDKL2Q92772 493 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 RGMAQ96B86 450 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 NTNG2Q96CW9 530 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 ERVK-6Q9BXR3 956 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 TRIM31Q9BZY9 425 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 UBQLN3Q9H347 655 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 DMRT3Q9NQL9 472 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 TRMT1Q9NXH9 659 aaKnown RBP20.97■□□□□ 0.95
SMAD5-207ENST00000511116 ZNF629Q9UEG4 869 aaPredicted RBP20.97■□□□□ 0.95
SMAD5-207ENST00000511116 FOXD3Q9UJU5 478 aaPredicted RBP20.97■□□□□ 0.95
SMAD5-207ENST00000511116 CBLCQ9ULV8 474 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 ERVK-19Q9WJR5 959 aa20.97■□□□□ 0.95
SMAD5-207ENST00000511116 TCRBV9S1A1TA0A576 114 aa20.96■□□□□ 0.95
SMAD5-207ENST00000511116 DVL2O14641 736 aa20.96■□□□□ 0.95
SMAD5-207ENST00000511116 GPR75O95800 540 aa20.96■□□□□ 0.95
SMAD5-207ENST00000511116 S100BP04271 92 aaPredicted RBP20.96■□□□□ 0.95
SMAD5-207ENST00000511116 PCNAP12004 261 aa20.96■□□□□ 0.95
SMAD5-207ENST00000511116 FOSL1P15407 271 aa20.96■□□□□ 0.95
SMAD5-207ENST00000511116 FOXD4Q12950 439 aaPredicted RBP20.96■□□□□ 0.95
SMAD5-207ENST00000511116 DLG1Q12959 904 aa20.96■□□□□ 0.95
SMAD5-207ENST00000511116 DUSP8Q13202 625 aa20.96■□□□□ 0.95
SMAD5-207ENST00000511116 RNF111Q6ZNA4 994 aa20.96■□□□□ 0.95
SMAD5-207ENST00000511116 CAPN12Q6ZSI9 719 aa20.96■□□□□ 0.95
SMAD5-207ENST00000511116 SLC29A4Q7RTT9 530 aa20.96■□□□□ 0.95
SMAD5-207ENST00000511116 LACC1Q8IV20 430 aa20.96■□□□□ 0.95
SMAD5-207ENST00000511116 TNIP2Q8NFZ5 429 aa20.96■□□□□ 0.95
SMAD5-207ENST00000511116 PYROXD1Q8WU10 500 aa20.96■□□□□ 0.95
SMAD5-207ENST00000511116 DOHHQ9BU89 302 aa20.96■□□□□ 0.95
SMAD5-207ENST00000511116 PRDM14Q9GZV8 571 aa20.96■□□□□ 0.95
SMAD5-207ENST00000511116 ALG9Q9H6U8 611 aa20.96■□□□□ 0.95
SMAD5-207ENST00000511116 TXNDC16Q9P2K2 825 aa20.96■□□□□ 0.95
SMAD5-207ENST00000511116 OPTCQ9UBM4 332 aa20.96■□□□□ 0.95
SMAD5-207ENST00000511116 RPH3AQ9Y2J0 694 aaPredicted RBP20.96■□□□□ 0.95
SMAD5-207ENST00000511116 ASB4Q9Y574 426 aa20.96■□□□□ 0.95
SMAD5-207ENST00000511116 IQANK1A0A1B0GTG1 560 aa20.95■□□□□ 0.94
SMAD5-207ENST00000511116 KDM4EB2RXH2 506 aaPredicted RBP20.95■□□□□ 0.94
SMAD5-207ENST00000511116 EIF3HO15372 352 aaKnown RBP eCLIP20.95■□□□□ 0.94
SMAD5-207ENST00000511116 KERAO60938 352 aa20.95■□□□□ 0.94
SMAD5-207ENST00000511116 PRKRAO75569 313 aaKnown RBP20.95■□□□□ 0.94
SMAD5-207ENST00000511116 SLC35E2BP0CK96 405 aa20.95■□□□□ 0.94
SMAD5-207ENST00000511116 DNASE1P24855 282 aa20.95■□□□□ 0.94
SMAD5-207ENST00000511116 TLX1P31314 330 aaPredicted RBP20.95■□□□□ 0.94
SMAD5-207ENST00000511116 UQCRC1P31930 480 aa20.95■□□□□ 0.94
SMAD5-207ENST00000511116 GMPRP36959 345 aa20.95■□□□□ 0.94
SMAD5-207ENST00000511116 PPP2R2AP63151 447 aa20.95■□□□□ 0.94
SMAD5-207ENST00000511116 MAATS1Q7Z4T9 603 aa20.95■□□□□ 0.94
SMAD5-207ENST00000511116 CAMKMTQ7Z624 323 aa20.95■□□□□ 0.94
SMAD5-207ENST00000511116 LIX1Q8N485 282 aa20.95■□□□□ 0.94
SMAD5-207ENST00000511116 RNF175Q8N4F7 328 aa20.95■□□□□ 0.94
SMAD5-207ENST00000511116 ZNF597Q96LX8 424 aa20.95■□□□□ 0.94
SMAD5-207ENST00000511116 TIMP4Q99727 224 aa20.95■□□□□ 0.94
SMAD5-207ENST00000511116 EDARQ9UNE0 448 aa20.95■□□□□ 0.94
SMAD5-207ENST00000511116 PLEKHA6Q9Y2H5 1048 aa20.95■□□□□ 0.94
SMAD5-207ENST00000511116 SNX24Q9Y343 169 aa20.95■□□□□ 0.94
SMAD5-207ENST00000511116 NSD1Q96L73 2696 aaPredicted RBP20.95■□□□□ 0.94
SMAD5-207ENST00000511116 A0A0A6YYD5 115 aa20.94■□□□□ 0.94
SMAD5-207ENST00000511116 FAM155BO75949 473 aa20.94■□□□□ 0.94
SMAD5-207ENST00000511116 HPNP05981 417 aa20.94■□□□□ 0.94
SMAD5-207ENST00000511116 MTHFD2P13995 350 aa20.94■□□□□ 0.94
SMAD5-207ENST00000511116 BMP5P22003 454 aa20.94■□□□□ 0.94
SMAD5-207ENST00000511116 BUD31P41223 144 aaPredicted RBP20.94■□□□□ 0.94
SMAD5-207ENST00000511116 TRPC1P48995 793 aa20.94■□□□□ 0.94
SMAD5-207ENST00000511116 ZNF136P52737 540 aa20.94■□□□□ 0.94
SMAD5-207ENST00000511116 ZNF267Q14586 743 aaPredicted RBP20.94■□□□□ 0.94
SMAD5-207ENST00000511116 NHSL2Q5HYW2 709 aa20.94■□□□□ 0.94
SMAD5-207ENST00000511116 FNDC7Q5VTL7 733 aa20.94■□□□□ 0.94
SMAD5-207ENST00000511116 PAMR1Q6UXH9 720 aa20.94■□□□□ 0.94
SMAD5-207ENST00000511116 RIT1Q92963 219 aa20.94■□□□□ 0.94
SMAD5-207ENST00000511116 EXT2Q93063 718 aa20.94■□□□□ 0.94
SMAD5-207ENST00000511116 TP53INP1Q96A56 240 aa20.94■□□□□ 0.94
SMAD5-207ENST00000511116 LRRC46Q96FV0 321 aa20.94■□□□□ 0.94
SMAD5-207ENST00000511116 GAL3ST4Q96RP7 486 aa20.94■□□□□ 0.94
SMAD5-207ENST00000511116 SECISBP2Q96T21 854 aaKnown RBP20.94■□□□□ 0.94
SMAD5-207ENST00000511116 DDX31Q9H8H2 851 aaKnown RBP20.94■□□□□ 0.94
SMAD5-207ENST00000511116 NMRAL1Q9HBL8 299 aa20.94■□□□□ 0.94
SMAD5-207ENST00000511116 LYARQ9NX58 379 aaKnown RBP20.94■□□□□ 0.94
SMAD5-207ENST00000511116 MTRF1LQ9UGC7 380 aaKnown RBP20.94■□□□□ 0.94
SMAD5-207ENST00000511116 DNHD1Q96M86 4753 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms