RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 LRRC70Q7Z2Q7 622 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 GPR180Q86V85 440 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 FAM13CQ8NE31 585 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 NINJ1Q92982 152 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 NXNL1Q96CM4 212 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 JSRP1Q96MG2 331 aaPredicted RBP14.59□□□□□ -0.07
RAB40C-202ENST00000509637 MTERF1Q99551 399 aaKnown RBP14.59□□□□□ -0.07
RAB40C-202ENST00000509637 PHACTR1Q9C0D0 580 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 CLEC4MQ9H2X3 399 aaPredicted RBP14.59□□□□□ -0.07
RAB40C-202ENST00000509637 EPB41L4BQ9H329 900 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 UBQLN3Q9H347 655 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 EXO5Q9H790 373 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 CNOT10Q9H9A5 744 aaKnown RBP14.59□□□□□ -0.07
RAB40C-202ENST00000509637 GRHL1Q9NZI5 618 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 RNF112Q9ULX5 631 aa14.59□□□□□ -0.07
RAB40C-202ENST00000509637 EXPH5Q8NEV8 1989 aa14.58□□□□□ -0.07
RAB40C-202ENST00000509637 NIPBLQ6KC79 2804 aaeCLIP14.58□□□□□ -0.08
RAB40C-202ENST00000509637 HMX2A2RU54 273 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 GBAP04062 536 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 GABRA1P14867 456 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 BMP5P22003 454 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 SLCO1A2P46721 670 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 NEK2P51955 445 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 RAB10P61026 200 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 KCNJ2P63252 427 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 IRF9Q00978 393 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 TGM3Q08188 693 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 SPRED3Q2MJR0 410 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 FBXL19-AS1Q494R0 122 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 PAGE2BQ5JRK9 111 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 GRHL2Q6ISB3 625 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 SLC15A4Q8N697 577 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 SIMC1Q8NDZ2 872 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 SRFBP1Q8NEF9 429 aaKnown RBP14.58□□□□□ -0.08
RAB40C-202ENST00000509637 LINC01560Q8TB33 94 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 UBTD2Q8WUN7 234 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 CMTM7Q96FZ5 175 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 GNRHR2Q96P88 292 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 GAL3ST4Q96RP7 486 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 KRT12Q99456 494 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 CPNE1Q99829 537 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 ROGDIQ9GZN7 287 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 DPH5Q9H2P9 285 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 SAYSD1Q9NPB0 183 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 COPS7AQ9UBW8 275 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 DTX4Q9Y2E6 619 aa14.58□□□□□ -0.08
RAB40C-202ENST00000509637 K7EPI3 171 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 GPR75O95800 540 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 AIFM1O95831 613 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 STMN1P16949 149 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 S1PR1P21453 382 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 GP5P40197 560 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 PIK3CGP48736 1102 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 SLC12A2P55011 1212 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 DAZAP2Q15038 168 aaPredicted RBP14.57□□□□□ -0.08
RAB40C-202ENST00000509637 EIPR1Q53HC9 387 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 UBAP2Q5T6F2 1119 aaKnown RBP14.57□□□□□ -0.08
RAB40C-202ENST00000509637 CHSY3Q70JA7 882 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 ST13P4Q8IZP2 240 aaPredicted RBP14.57□□□□□ -0.08
RAB40C-202ENST00000509637 CENPLQ8N0S6 344 aaPredicted RBP14.57□□□□□ -0.08
RAB40C-202ENST00000509637 ZCCHC7Q8N3Z6 543 aaKnown RBP14.57□□□□□ -0.08
RAB40C-202ENST00000509637 TEX9Q8N6V9 391 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 ZNF615Q8N8J6 731 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 WFDC11Q8NEX6 87 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 SLC22A8Q8TCC7 542 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 SPPL2AQ8TCT8 520 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 PYROXD1Q8WU10 500 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 KCTD4Q8WVF5 259 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 TANKQ92844 425 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 ADIPOR1Q96A54 375 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 RGMAQ96B86 450 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 RBM18Q96H35 190 aaKnown RBP14.57□□□□□ -0.08
RAB40C-202ENST00000509637 WDYHV1Q96HA8 205 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 PLEKHF2Q9H8W4 249 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 NSMCE4AQ9NXX6 385 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 CNIH4Q9P003 139 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 BOKQ9UMX3 212 aaPredicted RBP14.57□□□□□ -0.08
RAB40C-202ENST00000509637 PCDHGB3Q9Y5G1 929 aa14.57□□□□□ -0.08
RAB40C-202ENST00000509637 SYNDIG1LA6NDD5 238 aa14.56□□□□□ -0.08
RAB40C-202ENST00000509637 TACR1P25103 407 aa14.56□□□□□ -0.08
RAB40C-202ENST00000509637 HPDP32754 393 aaPredicted RBP14.56□□□□□ -0.08
RAB40C-202ENST00000509637 PTGDSP41222 190 aa14.56□□□□□ -0.08
RAB40C-202ENST00000509637 CDK9P50750 372 aaKnown RBP14.56□□□□□ -0.08
RAB40C-202ENST00000509637 HIST2H2ACQ16777 129 aaPredicted RBP14.56□□□□□ -0.08
RAB40C-202ENST00000509637 KBTBD12Q3ZCT8 623 aa14.56□□□□□ -0.08
RAB40C-202ENST00000509637 FLYWCH1Q4VC44 716 aa14.56□□□□□ -0.08
RAB40C-202ENST00000509637 VASNQ6EMK4 673 aa14.56□□□□□ -0.08
RAB40C-202ENST00000509637 HIST2H2AA3Q6FI13 130 aa14.56□□□□□ -0.08
RAB40C-202ENST00000509637 C3orf62Q6ZUJ4 267 aa14.56□□□□□ -0.08
RAB40C-202ENST00000509637 CYS1Q717R9 158 aa14.56□□□□□ -0.08
RAB40C-202ENST00000509637 PRR22Q8IZ63 422 aa14.56□□□□□ -0.08
RAB40C-202ENST00000509637 MYRIPQ8NFW9 859 aa14.56□□□□□ -0.08
RAB40C-202ENST00000509637 WDR20Q8TBZ3 569 aa14.56□□□□□ -0.08
RAB40C-202ENST00000509637 RNASE6Q93091 150 aaKnown RBP14.56□□□□□ -0.08
RAB40C-202ENST00000509637 TSPAN17Q96FV3 270 aa14.56□□□□□ -0.08
RAB40C-202ENST00000509637 DOHHQ9BU89 302 aa14.56□□□□□ -0.08
RAB40C-202ENST00000509637 PRDM14Q9GZV8 571 aa14.56□□□□□ -0.08
RAB40C-202ENST00000509637 DDX31Q9H8H2 851 aaKnown RBP14.56□□□□□ -0.08
RAB40C-202ENST00000509637 CXorf21Q9HAI6 301 aa14.56□□□□□ -0.08
RAB40C-202ENST00000509637 TEX10Q9NXF1 929 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms