RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 NUDT7P0C024 238 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 PIPP12273 146 aaPredicted RBP10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 RHCEP18577 417 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 GADD45AP24522 165 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 C21orf33P30042 268 aaPredicted RBP10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 SLC19A1P41440 591 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 RGS6P49758 472 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 TPMTP51580 245 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 CRYBA2P53672 197 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 CYP4F2P78329 520 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 SPIBQ01892 262 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 SMAD4Q13485 552 aaKnown RBP10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 CCINQ13939 588 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 PDE7AQ13946 482 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 ARHGAP19Q14CB8 494 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 CCDC92Q53HC0 331 aaPredicted RBP10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 ARMCX4Q5H9R4 360 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 GDPGP1Q6ZNW5 385 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 PRR23CQ6ZRP0 262 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 IKBIPQ70UQ0 350 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 GALNT10Q86SR1 603 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 C17orf64Q86WR6 236 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 ANKRD53Q8N9V6 530 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 WDR48Q8TAF3 677 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 SETD7Q8WTS6 366 aaKnown RBP10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 Q96MT0 163 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 RHNO1Q9BSD3 238 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 SORBS1Q9BX66 1292 aaKnown RBP10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 TRPV5Q9NQA5 729 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 ABCB10Q9NRK6 738 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 CLN6Q9NWW5 311 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 CRNNQ9UBG3 495 aaPredicted RBP10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 PNMA8BQ9ULN7 279 aaPredicted RBP10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 DUSP12Q9UNI6 340 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 EXO1Q9UQ84 846 aaKnown RBP10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 ANGPT4Q9Y264 503 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 WBP11Q9Y2W2 641 aaKnown RBP10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 MYO10Q9HD67 2058 aa10.46□□□□□ -0.74
SH3RF1-203ENST00000508685 NCOR1O75376 2440 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 CUL9Q8IWT3 2517 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 A0A075B6Q4 140 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 PRSS38A1L453 326 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 PRR19A6NJB7 356 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 H7BY64 318 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 HAT1O14929 419 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 GCM2O75603 506 aaPredicted RBP10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 CCNB2O95067 398 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 MVDP53602 400 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 LIMK1P53667 647 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 UGT2B15P54855 530 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 MRPS21P82921 87 aaKnown RBP10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 CDK6Q00534 326 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 MC1RQ01726 317 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 ST3GAL4Q11206 333 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 USP30Q70CQ3 517 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 TSEN54Q7Z6J9 526 aaKnown RBP10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 TRIM69Q86WT6 500 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 FAM20CQ8IXL6 584 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 POC5Q8NA72 575 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 PPCDCQ96CD2 204 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 PRAP1Q96NZ9 151 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 SLC35A5Q9BS91 424 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 C6orf62Q9GZU0 229 aaPredicted RBP10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 C8orf33Q9H7E9 229 aaPredicted RBP10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 ZBTB20Q9HC78 741 aaPredicted RBP10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 MYNNQ9NPC7 610 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 C1GALT1Q9NS00 363 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 ZNF226Q9NYT6 803 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 TAS2R9Q9NYW1 312 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 SCML1Q9UN30 329 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 NCKAP1Q9Y2A7 1128 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 MBTPS2O43462 519 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 KLHL18O94889 574 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 EML2O95834 649 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 ADORA3P0DMS8 318 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 DBTP11182 482 aaKnown RBP10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 GABRG2P18507 467 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 XCR1P46094 333 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 LIMS1P48059 325 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 IDH2P48735 452 aaKnown RBP10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 CDH12P55289 794 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 GAB1Q13480 694 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 BCL2A1Q16548 175 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 NDUFA5Q16718 116 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 EXOC3L2Q2M3D2 409 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 ZNF385BQ569K4 471 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 SPANXN2Q5MJ10 180 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 C19orf48Q6RUI8 117 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 Q6ZS52 159 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 RD3Q7Z3Z2 195 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 AKAP14Q86UN6 197 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 KRT73Q86Y46 540 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 HMGB4Q8WW32 186 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 SMPDL3AQ92484 453 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 MAL2Q969L2 176 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 CAMK1GQ96NX5 476 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 CCDC32Q9BV29 185 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 CDADC1Q9BWV3 514 aa10.45□□□□□ -0.74
SH3RF1-203ENST00000508685 NPAP1Q9NZP6 1156 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms