RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 TMEM184BQ9Y519 407 aaPredicted RBP3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 AHCTF1Q8WYP5 2266 aa3.35□□□□□ -1.87
UBE2D3-226ENST00000508635 FAM208BQ5VWN6 2430 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 PRRC2CQ9Y520 2896 aaKnown RBP3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 SPTBP11277 2137 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 IGLV3-16A0A075B6K0 115 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 IGHV5-51A0A0C4DH38 117 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 TRBV5-4A0A0C4DH59 114 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 A0A0G2JK05 382 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 TMEM272A0A1B0GTI8 110 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 LOC101059948A0A1B0GTJ6 334 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 C17orf113A0A1B0GUU1 675 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 SDR42E2A6NKP2 422 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 FOXO6A8MYZ6 492 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 H3BNX3 289 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 STX16-NPEPL1H3BU86 382 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 J3QKU1 62 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 AP3B1O00203 1094 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 PGRMC1O00264 195 aaKnown RBP3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 STX16O14662 325 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 SPAG6O75602 509 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 FAM155BO75949 473 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 NEURL1O76050 574 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 AP2A2O94973 939 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 IFNB1P01574 187 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 POLBP06746 335 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 APRTP07741 180 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 SLC35G4P0C7Q5 338 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 RALBP11234 206 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 PSG1P11464 419 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 SFTPCP11686 197 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 MLNP12872 115 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 ATP1B2P14415 290 aaPredicted RBP3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 FOLR1P15328 257 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 HOXB9P17482 250 aaPredicted RBP3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 NELFEP18615 380 aaKnown RBP3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 TPSB2P20231 275 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 F8A1P23610 371 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 TYK2P29597 1187 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 PBLDP30039 288 aaPredicted RBP3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 HADHAP40939 763 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 GRIA1P42261 906 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 MAGEA3P43357 314 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 CCR10P46092 362 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 CD151P48509 253 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 PRLHRP49683 370 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 RHAGQ02094 409 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 LAMB3Q13751 1172 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 TUBB2AQ13885 445 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 KCNJ11Q14654 390 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 TPSAB1Q15661 275 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 INPP5JQ15735 1006 aaPredicted RBP3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 GPR33Q49SQ1 333 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 RUNDC3AQ59EK9 446 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 ENTPD8Q5MY95 495 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 DNTTIP2Q5QJE6 756 aaKnown RBP3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 PIK3CD-AS1Q5SR53 167 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 DUS1LQ6P1R4 473 aaKnown RBP3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 KLHL35Q6PF15 583 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 CCDC137Q6PK04 289 aaKnown RBP3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 CERS6Q6ZMG9 384 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 RINLQ6ZS11 566 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 NLRP9Q7RTR0 991 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 TAS2R42Q7RTR8 314 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 KMT5CQ86Y97 462 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 CFAP206Q8IYR0 622 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 MMP21Q8N119 569 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 C17orf53Q8N3J3 647 aaPredicted RBP3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 ESX1Q8N693 406 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 PTGR2Q8N8N7 351 aaPredicted RBP3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 CCDC89Q8N998 374 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 NAT8LQ8N9F0 302 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 ACVR1CQ8NER5 493 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 SPATA4Q8NEY3 305 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 OR52K1Q8NGK4 314 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 CEP70Q8NHQ1 597 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 C2CD4CQ8TF44 421 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 HEXDCQ8WVB3 486 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 THAP4Q8WY91 577 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 SLC25A28Q96A46 364 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 KIAA1143Q96AT1 154 aaPredicted RBP3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 LRRC45Q96CN5 670 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 MSI2Q96DH6 328 aaKnown RBP3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 KTI12Q96EK9 354 aaPredicted RBP3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 DCUN1D1Q96GG9 259 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 SLC45A3Q96JT2 553 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 DNAJC1Q96KC8 554 aaKnown RBP3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 RMDN2Q96LZ7 410 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 C12orf66Q96MD2 445 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 RUNDC3BQ96NL0 473 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 OR6C1Q96RD1 312 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 COPS8Q99627 209 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 NPAS1Q99742 590 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 MAP3K3Q99759 626 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 CCM2Q9BSQ5 444 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 TUBB2BQ9BVA1 445 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 KIFC1Q9BW19 673 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 ULBP3Q9BZM4 244 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 ADNPQ9H2P0 1102 aa3.34□□□□□ -1.87
UBE2D3-226ENST00000508635 TFB2MQ9H5Q4 396 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms