RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 BBOF1Q8ND07 529 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 SRFBP1Q8NEF9 429 aaKnown RBP8.58□□□□□ -1.04
NEDD9-211ENST00000508546 FAM45AQ8TCE6 357 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 DGAT2Q96PD7 388 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 KCNC2Q96PR1 638 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 SECISBP2Q96T21 854 aaKnown RBP8.58□□□□□ -1.04
NEDD9-211ENST00000508546 MAPKAP1Q9BPZ7 522 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 CAPS2Q9BXY5 557 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 UGT2B28Q9BY64 529 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.58□□□□□ -1.043e-10■■□□□ 12.6
NEDD9-211ENST00000508546 GPRC5BQ9NZH0 403 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 FETUBQ9UGM5 382 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 SLC6A5Q9Y345 797 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 TESMINQ9Y4I5 508 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 OARD1Q9Y530 152 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 SPACA6W5XKT8 324 aa8.58□□□□□ -1.04
NEDD9-211ENST00000508546 TGP01266 2768 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 SVEP1Q4LDE5 3571 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 CAPN14A8MX76 684 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 A8MXE2 369 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 TP53I11O14683 189 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 PHF1O43189 567 aaPredicted RBP8.57□□□□□ -1.04
NEDD9-211ENST00000508546 CTIFO43310 598 aaKnown RBP8.57□□□□□ -1.04
NEDD9-211ENST00000508546 FGF17O60258 216 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 TRAPPC6AO75865 159 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 SCELO95171 688 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 RCBTB2O95199 551 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 ZNF37AP17032 561 aaPredicted RBP8.57□□□□□ -1.04
NEDD9-211ENST00000508546 ATP5A1P25705 553 aaKnown RBP8.57□□□□□ -1.04
NEDD9-211ENST00000508546 GDF5P43026 501 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 MSH2P43246 934 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 CPA2P48052 419 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 PGGT1BP53609 377 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 GNG11P61952 73 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 EEF1A1P68104 462 aaKnown RBP8.57□□□□□ -1.04
NEDD9-211ENST00000508546 PLIN5Q00G26 463 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 ID2Q02363 134 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 FOXF2Q12947 444 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 RPS6KA2Q15349 733 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 ACKR1Q16570 336 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 SPRED3Q2MJR0 410 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 DCST1Q5T197 706 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 EEF1A1P5Q5VTE0 462 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 FNDC7Q5VTL7 733 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 SYT10Q6XYQ8 523 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 ZNF793Q6ZN11 406 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 C20orf204Q6ZNR8 217 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 SLC29A4Q7RTT9 530 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 ADGRE4PQ86SQ3 457 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 LUZP2Q86TE4 346 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 NAT8LQ8N9F0 302 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 ACOT4Q8N9L9 421 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 KIF18AQ8NI77 898 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 PPP1R14CQ8TAE6 165 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 DIO2Q92813 273 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 ABTB1Q969K4 478 aaPredicted RBP8.57□□□□□ -1.04
NEDD9-211ENST00000508546 RHBDF1Q96CC6 855 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 WDR34Q96EX3 536 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 RBM18Q96H35 190 aaKnown RBP8.57□□□□□ -1.04
NEDD9-211ENST00000508546 F2RL3Q96RI0 385 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 UCN2Q96RP3 112 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 CCL19Q99731 98 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 TM9SF2Q99805 663 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 EGFL8Q99944 293 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 TBCDQ9BTW9 1192 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 ANGPTL4Q9BY76 406 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 GSX2Q9BZM3 304 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 WWTR1Q9GZV5 400 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 PIGMQ9H3S5 423 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 ZNF490Q9ULM2 529 aaPredicted RBP8.57□□□□□ -1.04
NEDD9-211ENST00000508546 GUCA1BQ9UMX6 200 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 C15orf41Q9Y2V0 281 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 NPFFR2Q9Y5X5 522 aa8.57□□□□□ -1.04
NEDD9-211ENST00000508546 PRR14LQ5THK1 2151 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.56□□□□□ -1.043e-14■■□□□ 12.9
NEDD9-211ENST00000508546 IQANK1A0A1B0GTG1 560 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 OR6C76A6NM76 312 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 DEFB108AA8MXU0 73 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 HRKO00198 91 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 CDC7O00311 574 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 SIAH2O43255 324 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 LRATO95237 230 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 CNOT4O95628 575 aaKnown RBP8.56□□□□□ -1.04
NEDD9-211ENST00000508546 ACTL6AO96019 429 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 CYP4B1P13584 511 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 CPN1P15169 458 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 HIST1H1TP22492 207 aaPredicted RBP8.56□□□□□ -1.04
NEDD9-211ENST00000508546 CPN2P22792 545 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 SOX18P35713 384 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 MC3RP41968 323 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 SLCO1A2P46721 670 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 MASP1P48740 699 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 NAGLUP54802 743 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 DIO3P55073 304 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 SLC37A1P57057 533 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 RUNX1T1Q06455 604 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 GAB1Q13480 694 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 EBPQ15125 230 aaKnown RBP8.56□□□□□ -1.04
NEDD9-211ENST00000508546 KRTAP24-1Q3LI83 254 aa8.56□□□□□ -1.04
NEDD9-211ENST00000508546 EIPR1Q53HC9 387 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms