RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 DCLRE1AQ6PJP8 1040 aa3.11□□□□□ -1.91
UBE2D3-225ENST00000508476 CASC1Q6TDU7 716 aa3.11□□□□□ -1.91
UBE2D3-225ENST00000508476 GCNT7Q6ZNI0 430 aa3.11□□□□□ -1.91
UBE2D3-225ENST00000508476 FAM47EQ6ZV65 393 aa3.11□□□□□ -1.91
UBE2D3-225ENST00000508476 GLRX5Q86SX6 157 aa3.11□□□□□ -1.91
UBE2D3-225ENST00000508476 LAX1Q8IWV1 398 aa3.11□□□□□ -1.91
UBE2D3-225ENST00000508476 ZNF444Q8N0Y2 327 aaPredicted RBP3.11□□□□□ -1.91
UBE2D3-225ENST00000508476 SIX6OS1Q8N1H7 587 aa3.11□□□□□ -1.91
UBE2D3-225ENST00000508476 GANCQ8TET4 914 aa3.11□□□□□ -1.91
UBE2D3-225ENST00000508476 SNRNP40Q96DI7 357 aaKnown RBP3.11□□□□□ -1.91
UBE2D3-225ENST00000508476 PIWIL1Q96J94 861 aaKnown RBP3.11□□□□□ -1.91
UBE2D3-225ENST00000508476 PARK7Q99497 189 aaKnown RBP3.11□□□□□ -1.91
UBE2D3-225ENST00000508476 ST6GALNAC5Q9BVH7 336 aa3.11□□□□□ -1.91
UBE2D3-225ENST00000508476 LRRC2Q9BYS8 371 aa3.11□□□□□ -1.91
UBE2D3-225ENST00000508476 ACPTQ9BZG2 426 aa3.11□□□□□ -1.91
UBE2D3-225ENST00000508476 SRD5A3Q9H8P0 318 aa3.11□□□□□ -1.91
UBE2D3-225ENST00000508476 ABCG2Q9UNQ0 655 aa3.11□□□□□ -1.91
UBE2D3-225ENST00000508476 KIF13AQ9H1H9 1805 aa3.11□□□□□ -1.91
UBE2D3-225ENST00000508476 KIAA1217Q5T5P2 1943 aa3.11□□□□□ -1.91
UBE2D3-225ENST00000508476 AQRO60306 1485 aaKnown RBP eCLIP3.1□□□□□ -1.914e-14■■■□□ 15.8
UBE2D3-225ENST00000508476 IFIT3O14879 490 aaKnown RBP3.1□□□□□ -1.91
UBE2D3-225ENST00000508476 LYPD3O95274 346 aa3.1□□□□□ -1.91
UBE2D3-225ENST00000508476 ERVPABLB-1P60509 514 aa3.1□□□□□ -1.91
UBE2D3-225ENST00000508476 KCTD2Q14681 263 aa3.1□□□□□ -1.91
UBE2D3-225ENST00000508476 KIAA0040Q15053 153 aa3.1□□□□□ -1.91
UBE2D3-225ENST00000508476 OTOAQ7RTW8 1153 aa3.1□□□□□ -1.91
UBE2D3-225ENST00000508476 ITIH5Q86UX2 942 aa3.1□□□□□ -1.91
UBE2D3-225ENST00000508476 RELL2Q8NC24 303 aaPredicted RBP3.1□□□□□ -1.91
UBE2D3-225ENST00000508476 ICA1LQ8NDH6 482 aa3.1□□□□□ -1.91
UBE2D3-225ENST00000508476 TRPV3Q8NET8 790 aa3.1□□□□□ -1.91
UBE2D3-225ENST00000508476 UBLCP1Q8WVY7 318 aaPredicted RBP3.1□□□□□ -1.91
UBE2D3-225ENST00000508476 MR1Q95460 341 aa3.1□□□□□ -1.91
UBE2D3-225ENST00000508476 VSIG2Q96IQ7 327 aa3.1□□□□□ -1.91
UBE2D3-225ENST00000508476 SSX3Q99909 188 aa3.1□□□□□ -1.91
UBE2D3-225ENST00000508476 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
UBE2D3-225ENST00000508476 ASB8Q9H765 288 aa3.1□□□□□ -1.91
UBE2D3-225ENST00000508476 ELL3Q9HB65 397 aaPredicted RBP3.1□□□□□ -1.91
UBE2D3-225ENST00000508476 ADGRL4Q9HBW9 690 aa3.1□□□□□ -1.91
UBE2D3-225ENST00000508476 WI2-2373I1.2A0A1W2PRP0 233 aa3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 CCER2I3L3R5 266 aa3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 SBK2P0C263 348 aa3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 CALML3P27482 149 aa3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 MFAP2P55001 183 aa3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 KRTAP10-1P60331 282 aa3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 MEF2DQ14814 521 aa3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 SLC10A1Q14973 349 aa3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 P2RY14Q15391 338 aa3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 ACKR1Q16570 336 aa3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 ACER2Q5QJU3 275 aa3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 KHDRBS2Q5VWX1 349 aaKnown RBP3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 ZNF530Q6P9A1 599 aaPredicted RBP3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 NHLRC1Q6VVB1 395 aa3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 Q6ZRG5 221 aa3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 FAM43BQ6ZT52 329 aaPredicted RBP3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 C17orf64Q86WR6 236 aa3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 ARL14Q8N4G2 192 aa3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 LINC01006Q8NI28 216 aa3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 CRYGNQ8WXF5 182 aa3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 AGPAT1Q99943 283 aa3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 NUSAP1Q9BXS6 441 aaKnown RBP3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 RNF41Q9H4P4 317 aaPredicted RBP3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 SLC25A19Q9HC21 320 aa3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 TECRQ9NZ01 308 aaKnown RBP3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 PRODH2Q9UF12 536 aa3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 CHD1O14646 1710 aa3.09□□□□□ -1.91
UBE2D3-225ENST00000508476 URB2Q14146 1524 aaKnown RBP3.09□□□□□ -1.92
UBE2D3-225ENST00000508476 TOP2BQ02880 1626 aa3.08□□□□□ -1.92
UBE2D3-225ENST00000508476 IGHV3OR16-12A0A075B7B8 117 aa3.08□□□□□ -1.92
UBE2D3-225ENST00000508476 EFCAB7A8K855 629 aa3.08□□□□□ -1.92
UBE2D3-225ENST00000508476 K7ERI5 159 aa3.08□□□□□ -1.92
UBE2D3-225ENST00000508476 ATP9AO75110 1047 aa3.08□□□□□ -1.92
UBE2D3-225ENST00000508476 LAMP1P11279 417 aa3.08□□□□□ -1.92
UBE2D3-225ENST00000508476 ARHGDIAP52565 204 aa3.08□□□□□ -1.92
UBE2D3-225ENST00000508476 STX17P56962 302 aa3.08□□□□□ -1.92
UBE2D3-225ENST00000508476 CKAP4Q07065 602 aaKnown RBP3.08□□□□□ -1.92
UBE2D3-225ENST00000508476 OR1C1Q15619 314 aa3.08□□□□□ -1.92
UBE2D3-225ENST00000508476 WSCD1Q658N2 575 aa3.08□□□□□ -1.92
UBE2D3-225ENST00000508476 IGFL2Q6UWQ7 119 aa3.08□□□□□ -1.92
UBE2D3-225ENST00000508476 KLHDC8AQ8IYD2 350 aa3.08□□□□□ -1.92
UBE2D3-225ENST00000508476 ERP27Q96DN0 273 aa3.08□□□□□ -1.92
UBE2D3-225ENST00000508476 MIS18AQ9NYP9 233 aa3.08□□□□□ -1.92
UBE2D3-225ENST00000508476 ADAM22Q9P0K1 906 aa3.08□□□□□ -1.92
UBE2D3-225ENST00000508476 SEC14L4Q9UDX3 406 aa3.08□□□□□ -1.92
UBE2D3-225ENST00000508476 SMARCA4P51532 1647 aa3.08□□□□□ -1.92
UBE2D3-225ENST00000508476 FRG2CA6NGY1 282 aa3.07□□□□□ -1.92
UBE2D3-225ENST00000508476 EPOPA6NHQ4 379 aa3.07□□□□□ -1.92
UBE2D3-225ENST00000508476 GPAA1O43292 621 aa3.07□□□□□ -1.92
UBE2D3-225ENST00000508476 CASTP20810 708 aaKnown RBP3.07□□□□□ -1.92
UBE2D3-225ENST00000508476 COPB2P35606 906 aa3.07□□□□□ -1.92
UBE2D3-225ENST00000508476 RIPK4P57078 832 aa3.07□□□□□ -1.92
UBE2D3-225ENST00000508476 TSPY1Q01534 308 aa3.07□□□□□ -1.92
UBE2D3-225ENST00000508476 GABPAQ06546 454 aa3.07□□□□□ -1.92
UBE2D3-225ENST00000508476 SCN1BQ07699 218 aa3.07□□□□□ -1.92
UBE2D3-225ENST00000508476 ARHGAP1Q07960 439 aa3.07□□□□□ -1.92
UBE2D3-225ENST00000508476 PTK6Q13882 451 aa3.07□□□□□ -1.92
UBE2D3-225ENST00000508476 PAN3Q58A45 887 aaKnown RBP3.07□□□□□ -1.92
UBE2D3-225ENST00000508476 PET117Q6UWS5 81 aa3.07□□□□□ -1.92
UBE2D3-225ENST00000508476 ASPGQ86U10 573 aa3.07□□□□□ -1.92
UBE2D3-225ENST00000508476 CEND1Q8N111 149 aa3.07□□□□□ -1.92
UBE2D3-225ENST00000508476 FAM162AQ96A26 154 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms