RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 LINC00242Q5T6M2 205 aa3.7□□□□□ -1.82
DHFR-204ENST00000508282 RFWD3Q6PCD5 774 aa3.7□□□□□ -1.82
DHFR-204ENST00000508282 OLFM4Q6UX06 510 aa3.7□□□□□ -1.82
DHFR-204ENST00000508282 TOM1L2Q6ZVM7 507 aa3.7□□□□□ -1.82
DHFR-204ENST00000508282 CACUL1Q86Y37 369 aa3.7□□□□□ -1.82
DHFR-204ENST00000508282 MRPL43Q8N983 215 aaKnown RBP3.7□□□□□ -1.82
DHFR-204ENST00000508282 RNF149Q8NC42 400 aa3.7□□□□□ -1.82
DHFR-204ENST00000508282 UBLCP1Q8WVY7 318 aaPredicted RBP3.7□□□□□ -1.82
DHFR-204ENST00000508282 SLC13A3Q8WWT9 602 aa3.7□□□□□ -1.82
DHFR-204ENST00000508282 RFT1Q96AA3 541 aa3.7□□□□□ -1.82
DHFR-204ENST00000508282 FAM111AQ96PZ2 611 aa3.7□□□□□ -1.82
DHFR-204ENST00000508282 HSD3B7Q9H2F3 369 aa3.7□□□□□ -1.82
DHFR-204ENST00000508282 VIPAS39Q9H9C1 493 aa3.7□□□□□ -1.82
DHFR-204ENST00000508282 S100A14Q9HCY8 104 aa3.7□□□□□ -1.82
DHFR-204ENST00000508282 ABCB10Q9NRK6 738 aa3.7□□□□□ -1.82
DHFR-204ENST00000508282 GPR173Q9NS66 373 aa3.7□□□□□ -1.82
DHFR-204ENST00000508282 MED17Q9NVC6 651 aa3.7□□□□□ -1.82
DHFR-204ENST00000508282 SLCO1C1Q9NYB5 712 aa3.7□□□□□ -1.82
DHFR-204ENST00000508282 SPG21Q9NZD8 308 aa3.7□□□□□ -1.82
DHFR-204ENST00000508282 ABCD2Q9UBJ2 740 aa3.7□□□□□ -1.82
DHFR-204ENST00000508282 GPR132Q9UNW8 380 aa3.7□□□□□ -1.82
DHFR-204ENST00000508282 TDRKHQ9Y2W6 561 aaKnown RBP3.7□□□□□ -1.82
DHFR-204ENST00000508282 AP1M2Q9Y6Q5 423 aa3.7□□□□□ -1.82
DHFR-204ENST00000508282 OR5H15A6NDH6 313 aa3.69□□□□□ -1.82
DHFR-204ENST00000508282 TRIM64CA6NLI5 447 aa3.69□□□□□ -1.82
DHFR-204ENST00000508282 C8orf89P0DMQ9 161 aa3.69□□□□□ -1.82
DHFR-204ENST00000508282 CCDC192P0DO97 292 aa3.69□□□□□ -1.82
DHFR-204ENST00000508282 CCND3P30281 292 aaPredicted RBP3.69□□□□□ -1.82
DHFR-204ENST00000508282 IER3P46695 156 aa3.69□□□□□ -1.82
DHFR-204ENST00000508282 TKTL1P51854 596 aa3.69□□□□□ -1.82
DHFR-204ENST00000508282 ATXN3P54252 364 aaPredicted RBP3.69□□□□□ -1.82
DHFR-204ENST00000508282 ADARP55265 1226 aaKnown RBP3.69□□□□□ -1.82
DHFR-204ENST00000508282 NDPQ00604 133 aa3.69□□□□□ -1.82
DHFR-204ENST00000508282 IQCCQ4KMZ1 466 aa3.69□□□□□ -1.82
DHFR-204ENST00000508282 ARMCX5Q6P1M9 558 aa3.69□□□□□ -1.82
DHFR-204ENST00000508282 NHLRC1Q6VVB1 395 aa3.69□□□□□ -1.82
DHFR-204ENST00000508282 TMEM64Q6YI46 380 aa3.69□□□□□ -1.82
DHFR-204ENST00000508282 CCDC83Q8IWF9 413 aa3.69□□□□□ -1.82
DHFR-204ENST00000508282 C11orf42Q8N5U0 333 aa3.69□□□□□ -1.82
DHFR-204ENST00000508282 ZNF781Q8N8C0 355 aa3.69□□□□□ -1.82
DHFR-204ENST00000508282 KIAA0895Q8NCT3 520 aa3.69□□□□□ -1.82
DHFR-204ENST00000508282 CNNM3Q8NE01 707 aa3.69□□□□□ -1.82
DHFR-204ENST00000508282 CKAP2Q8WWK9 683 aa3.69□□□□□ -1.82
DHFR-204ENST00000508282 N4BP2L2Q92802 583 aaPredicted RBP3.69□□□□□ -1.82
DHFR-204ENST00000508282 BCL2L2Q92843 193 aaPredicted RBP3.69□□□□□ -1.82
DHFR-204ENST00000508282 SYAP1Q96A49 352 aaPredicted RBP3.69□□□□□ -1.82
DHFR-204ENST00000508282 ZNF274Q96GC6 653 aaPredicted RBP3.69□□□□□ -1.82
DHFR-204ENST00000508282 SERAC1Q96JX3 654 aa3.69□□□□□ -1.82
DHFR-204ENST00000508282 RANBP9Q96S59 729 aa3.69□□□□□ -1.82
DHFR-204ENST00000508282 OSBPL8Q9BZF1 889 aa3.69□□□□□ -1.82
DHFR-204ENST00000508282 SRD5A3Q9H8P0 318 aa3.69□□□□□ -1.82
DHFR-204ENST00000508282 XPO7Q9UIA9 1087 aaKnown RBP3.69□□□□□ -1.82
DHFR-204ENST00000508282 CELA1Q9UNI1 258 aa3.69□□□□□ -1.82
DHFR-204ENST00000508282 FBXO7Q9Y3I1 522 aa3.69□□□□□ -1.82
DHFR-204ENST00000508282 K7EPI3 171 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 TTI1O43156 1089 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 SMPD2O60906 423 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 KBTBD11O94819 623 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 LETM1O95202 739 aaPredicted RBP3.68□□□□□ -1.82
DHFR-204ENST00000508282 TRIM16O95361 564 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 IGHG3P01860 377 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 FERP16591 822 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 ARF4P18085 180 aaPredicted RBP3.68□□□□□ -1.82
DHFR-204ENST00000508282 GJB2P29033 226 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 RABIFP47224 123 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 FHITP49789 147 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 GMFBP60983 142 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 ANKDD1AQ495B1 522 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 IFI44LQ53G44 452 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 FHL5Q5TD97 284 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 LYPLAL1Q5VWZ2 237 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 CCDC71Q8IV32 467 aaPredicted RBP3.68□□□□□ -1.82
DHFR-204ENST00000508282 SIAH3Q8IW03 269 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 CLEC1AQ8NC01 280 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 CCDC110Q8TBZ0 833 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 URGCPQ8TCY9 931 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 ERGIC2Q96RQ1 377 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 RASL10BQ96S79 203 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 C17orf62Q9BQA9 187 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 ZNF665Q9H7R5 613 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 RNPEPL1Q9HAU8 725 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 DNAJC11Q9NVH1 559 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 ARMCX1Q9P291 453 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 ZNF319Q9P2F9 582 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 AURKCQ9UQB9 309 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 SLC6A5Q9Y345 797 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 STRAPQ9Y3F4 350 aaKnown RBP3.68□□□□□ -1.82
DHFR-204ENST00000508282 ETV7Q9Y603 341 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 HCFC1P51610 2035 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 ATP8B3O60423 1300 aa3.68□□□□□ -1.82
DHFR-204ENST00000508282 A0A0A6YYC8 382 aaPredicted RBP3.67□□□□□ -1.82
DHFR-204ENST00000508282 FAM168BA1KXE4 195 aa3.67□□□□□ -1.82
DHFR-204ENST00000508282 FOXI3A8MTJ6 420 aaPredicted RBP3.67□□□□□ -1.82
DHFR-204ENST00000508282 TMCO5BA8MYB1 307 aa3.67□□□□□ -1.82
DHFR-204ENST00000508282 I3L1I5 382 aaPredicted RBP3.67□□□□□ -1.82
DHFR-204ENST00000508282 M0R296 226 aa3.67□□□□□ -1.82
DHFR-204ENST00000508282 CACNB4O00305 520 aaPredicted RBP3.67□□□□□ -1.82
DHFR-204ENST00000508282 SRPX2O60687 465 aaPredicted RBP3.67□□□□□ -1.82
DHFR-204ENST00000508282 RAD51DO75771 328 aa3.67□□□□□ -1.82
DHFR-204ENST00000508282 LYNP07948 512 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms