RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-222	ENST00000508238	STX16	O14662	325 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	PROM1	O43490	865 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	KRT38	O76015	456 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	IGKV3-11	P04433	115 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	INHBA	P08476	426 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	PCNA	P12004	261 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	GFAP	P14136	432 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	ZNF24	P17028	368 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	SSR2	P43308	183 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	STT3A	P46977	705 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	SSR4	P51571	173 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	SLAMF1	Q13291	335 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	GTF2H2	Q13888	395 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	MPEG1	Q2M385	716 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	TECRL	Q5HYJ1	363 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	UBAP2	Q5T6F2	1119 aa	Known RBP	7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	LGSN	Q5TDP6	509 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	MRM1	Q6IN84	353 aa	Known RBP	7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	GTF2H2C	Q6P1K8	395 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	XKRX	Q6PP77	449 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	MDGA2	Q7Z553	956 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	GOLGA7	Q7Z5G4	137 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	CLNK	Q7Z7G1	428 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	GPR180	Q86V85	440 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	TRIM42	Q8IWZ5	723 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	CYP4Z2P	Q8N1L4	340 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	PLD6	Q8N2A8	252 aa	Known RBP	7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	GHDC	Q8N2G8	530 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	ZNF808	Q8N4W9	903 aa	Predicted RBP	7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	TMEM156	Q8N614	296 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	OR5L2	Q8NGL0	311 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	KIF18A	Q8NI77	898 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	WDR20	Q8TBZ3	569 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	ITLN2	Q8WWU7	325 aa	Predicted RBP	7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	CCDC120	Q96HB5	630 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	SGCZ	Q96LD1	299 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	MRPL57	Q9BQC6	102 aa	Known RBP	7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	NTMT1	Q9BV86	223 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	OR51B5	Q9H339	312 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	IPPK	Q9H8X2	491 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	ACTR8	Q9H981	624 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	SUCO	Q9UBS9	1254 aa	Known RBP	7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	PHF11	Q9UIL8	331 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	FBXW2	Q9UKT8	454 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	NPIPA1	Q9UND3	350 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	IKBKG	Q9Y6K9	419 aa		7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	PHF3	Q92576	2039 aa	Known RBP	7.38	□□□□□ -1.23
UBE2D3-222	ENST00000508238	TACC2	O95359	2948 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238		A0A0A6YYD5	115 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	LRRC14B	A6NHZ5	514 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	C17orf105	B2RV13	164 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	OR7A17	O14581	309 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	PEX1	O43933	1283 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	FGF17	O60258	216 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	PRKN	O60260	465 aa	Predicted RBP	7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	LDB3	O75112	727 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	OR2J2	O76002	312 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	SEMA3D	O95025	777 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	SIX3	O95343	332 aa	Predicted RBP	7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	CLDN9	O95484	217 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	ETHE1	O95571	254 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	ACSL3	O95573	720 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	IFNA16	P05015	189 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	ABHD2	P08910	425 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	COX7A2	P14406	83 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	TNNI3	P19429	210 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	CPN2	P22792	545 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	NOS3	P29474	1203 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	TLX1	P31314	330 aa	Predicted RBP	7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	GALNS	P34059	522 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	BSG	P35613	385 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	RAP1GDS1	P52306	607 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	HK2	P52789	917 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	RNF4	P78317	190 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	PHEX	P78562	749 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	UAP1	Q16222	522 aa	Predicted RBP	7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	C3AR1	Q16581	482 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	CPSF6	Q16630	551 aa	Known RBP eCLIP	7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	SP5	Q6BEB4	398 aa	Predicted RBP	7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	TIFAB	Q6ZNK6	161 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	TAOK1	Q7L7X3	1001 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	MRGPRG	Q86SM5	289 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	CD163	Q86VB7	1156 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	LCA5	Q86VQ0	697 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	TICAM1	Q8IUC6	712 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	CPSF7	Q8N684	471 aa	Known RBP	7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	CEP112	Q8N8E3	955 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	GOLM1	Q8NBJ4	401 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	NUBPL	Q8TB37	319 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	SLC2A12	Q8TD20	617 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	ZNF721	Q8TF20	911 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	DCAKD	Q8WVC6	231 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	IFT81	Q8WYA0	676 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	RBM18	Q96H35	190 aa	Known RBP	7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	SENP5	Q96HI0	755 aa	Predicted RBP	7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	MAGED4	Q96JG8	741 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	RASL10B	Q96S79	203 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	PAFAH2	Q99487	392 aa		7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	MTERF1	Q99551	399 aa	Known RBP	7.37	□□□□□ -1.23
UBE2D3-222	ENST00000508238	C1QTNF3	Q9BXJ4	246 aa		7.37	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms