RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 CSKP41240 450 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 CAPZA2P47755 286 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 OR1E2P47887 323 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 OR3A3P47888 321 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 STK19P49842 368 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 SMSP52788 366 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 CRYBA2P53672 197 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 AP2S1P53680 142 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 ATP12AP54707 1039 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 WNT4P56705 351 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 CLDN20P56880 219 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 DCDC1P59894 354 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 RRAS2P62070 204 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 CD83Q01151 205 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 UBE3AQ05086 875 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZNF91Q05481 1191 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 EEF1A2Q05639 463 aaKnown RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 HNRNPA0Q13151 305 aaKnown RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 ADAM15Q13444 863 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 GAB1Q13480 694 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 NAE1Q13564 534 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 TP53BP2Q13625 1128 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 TPBGQ13641 420 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZNF79Q15937 498 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 BAK1Q16611 211 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 CCL14Q16627 93 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 TATDN3Q17R31 274 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 WSCD2Q2TBF2 565 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 CCDC58Q4VC31 144 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 MPPE1Q53F39 396 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 SOWAHCQ53LP3 525 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZNF628Q5EBL2 1059 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 SNAP47Q5SQN1 464 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 TPGS2Q68CL5 300 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZNF770Q6IQ21 691 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 SLC8B1Q6J4K2 584 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 RGMBQ6NW40 437 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 AGTRAPQ6RW13 159 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 CRTC1Q6UUV9 634 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 SLC36A4Q6YBV0 504 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZNF730Q6ZMV8 503 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 DPY19L3Q6ZPD9 716 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 IDO2Q6ZQW0 420 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 QSOX2Q6ZRP7 698 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 TSEN54Q7Z6J9 526 aaKnown RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 LUZP2Q86TE4 346 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 RASGRP3Q8IV61 690 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 ELMOD2Q8IZ81 293 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 ADGRG2Q8IZP9 1017 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 CAMKK1Q8N5S9 505 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 LRRC17Q8N6Y2 441 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 YIPF7Q8N8F6 280 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 C2orf69Q8N8R5 385 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZNF557Q8N988 423 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 SPERTQ8NA61 448 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 FBXO15Q8NCQ5 510 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 GPR26Q8NDV2 337 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 OR7G3Q8NG95 312 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 OR2AP1Q8NGE2 309 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 OR9Q2Q8NGE9 314 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 OR56A3Q8NH54 315 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 TMEM163Q8TC26 289 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 DEDD2Q8WXF8 326 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 OR5P2Q8WZ92 322 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 ELMO1Q92556 727 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 AKAP1Q92667 903 aaKnown RBP eCLIP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 RFKQ969G6 155 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 MAL2Q969L2 176 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 CREB3L1Q96BA8 519 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 WDR34Q96EX3 536 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 QRFPRQ96P65 431 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 NEDD4LQ96PU5 975 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 SLC38A2Q96QD8 506 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 IL4I1Q96RQ9 567 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 MTERF1Q99551 399 aaKnown RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 P2RY13Q9BPV8 354 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 DHRS9Q9BPW9 319 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 FAM83CQ9BQN1 747 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 CPEB1Q9BZB8 566 aaKnown RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 BARHL1Q9BZE3 327 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 TM6SF2Q9BZW4 377 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 RANBP3Q9H6Z4 567 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 TRIM39Q9HCM9 518 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 RANGRFQ9HD47 186 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 ABCB9Q9NP78 766 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 FGF20Q9NP95 211 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 C11orf16Q9NQ32 467 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 MIEF1Q9NQG6 463 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 MRPS18AQ9NVS2 196 aaKnown RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 TXNL4BQ9NX01 149 aaKnown RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 NFKBIL1Q9UBC1 381 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 RABL2AQ9UBK7 228 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 NUP50Q9UKX7 468 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 LRFN2Q9ULH4 789 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 ZMIZ1Q9ULJ6 1067 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 RABL2BQ9UNT1 228 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 ICKQ9UPZ9 632 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 SLC9A8Q9Y2E8 581 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 PCDHB7Q9Y5E2 793 aa4.72□□□□□ -1.65
HMGB3P16-201ENST00000508037 BACE2Q9Y5Z0 518 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms