RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 ELAVL1Q15717 326 aaKnown RBP12.59□□□□□ -0.39
UBE2D3-221ENST00000507845 CEBPEQ15744 281 aa12.59□□□□□ -0.39
UBE2D3-221ENST00000507845 MPEG1Q2M385 716 aa12.59□□□□□ -0.39
UBE2D3-221ENST00000507845 PDCD4Q53EL6 469 aaKnown RBP12.59□□□□□ -0.39
UBE2D3-221ENST00000507845 PAPD4Q6PIY7 484 aaKnown RBP12.59□□□□□ -0.39
UBE2D3-221ENST00000507845 NDUFAF7Q7L592 441 aa12.59□□□□□ -0.39
UBE2D3-221ENST00000507845 SPATA21Q7Z572 469 aa12.59□□□□□ -0.39
UBE2D3-221ENST00000507845 R3HCC1LQ7Z5L2 792 aaKnown RBP12.59□□□□□ -0.39
UBE2D3-221ENST00000507845 CPLX4Q7Z7G2 160 aa12.59□□□□□ -0.39
UBE2D3-221ENST00000507845 ST13P4Q8IZP2 240 aaPredicted RBP12.59□□□□□ -0.39
UBE2D3-221ENST00000507845 OR7A2PQ8NGA2 310 aa12.59□□□□□ -0.39
UBE2D3-221ENST00000507845 PPCDCQ96CD2 204 aa12.59□□□□□ -0.39
UBE2D3-221ENST00000507845 VPS50Q96JG6 964 aa12.59□□□□□ -0.39
UBE2D3-221ENST00000507845 TEX37Q96LM6 180 aa12.59□□□□□ -0.39
UBE2D3-221ENST00000507845 DGAT2Q96PD7 388 aa12.59□□□□□ -0.39
UBE2D3-221ENST00000507845 ELAC2Q9BQ52 826 aaKnown RBP12.59□□□□□ -0.39
UBE2D3-221ENST00000507845 PELOQ9BRX2 385 aaKnown RBP12.59□□□□□ -0.39
UBE2D3-221ENST00000507845 SDR39U1Q9NRG7 319 aaPredicted RBP12.59□□□□□ -0.39
UBE2D3-221ENST00000507845 PNO1Q9NRX1 252 aaKnown RBP12.59□□□□□ -0.39
UBE2D3-221ENST00000507845 MAPRE3Q9UPY8 281 aa12.59□□□□□ -0.39
UBE2D3-221ENST00000507845 POLHQ9Y253 713 aa12.59□□□□□ -0.39
UBE2D3-221ENST00000507845 ZNF780BQ9Y6R6 833 aa12.59□□□□□ -0.39
UBE2D3-221ENST00000507845 MGAQ8IWI9 3026 aa12.59□□□□□ -0.39
UBE2D3-221ENST00000507845 SAGE2PA6NJ88 616 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 MYO1GB0I1T2 1018 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 HPP00738 406 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 LAMP1P11279 417 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 COX7A2P14406 83 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 IL12AP29459 219 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 CLNS1AP54105 237 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 PLIN5Q00G26 463 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 RPS6KA2Q15349 733 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 DGAT2L6Q6ZPD8 337 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 CAMKMTQ7Z624 323 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 SAMD14Q8IZD0 417 aaPredicted RBP12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 LRRC25Q8N386 305 aaPredicted RBP12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 AMER2Q8N7J2 671 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 PTPMT1Q8WUK0 201 aaPredicted RBP12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 SNRNP27Q8WVK2 155 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 CIDECQ96AQ7 238 aaPredicted RBP12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 PPWD1Q96BP3 646 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 TESCQ96BS2 214 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 COQ8BQ96D53 544 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 IMMP1LQ96LU5 166 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 LPAR4Q99677 370 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 EPN3Q9H201 632 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 RABEP2Q9H5N1 569 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 ZNF385DQ9H6B1 395 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 CLMPQ9H6B4 373 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 SLAMF7Q9NQ25 335 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 GIMAP4Q9NUV9 329 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 ZIM2Q9NZV7 527 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 SH3BP4Q9P0V3 963 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 ENTPD4Q9Y227 616 aa12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 COPG1Q9Y678 874 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-221ENST00000507845 NSG1A0A0A6YYJ2 146 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 C17orf105B2RV13 164 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 MASP2O00187 686 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 PDPK1O15530 556 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 OR10H2O60403 315 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 SNX3O60493 162 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 ATP1B1P05026 303 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 DDX5P17844 614 aaKnown RBP12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 NCF2P19878 526 aaPredicted RBP12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 GPX3P22352 226 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 NTSP30990 170 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 GALNSP34059 522 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 PTGER1P34995 402 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 FRKP42685 505 aaPredicted RBP12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 ATP4BP51164 291 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 SLC26A5P58743 744 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 STX1BP61266 288 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 IRX1P78414 480 aaPredicted RBP12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 TERF2Q15554 542 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 DEFB109BQ30KR1 87 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 DCAF10Q5QP82 559 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 CPTPQ5TA50 214 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 METTL21CQ5VZV1 264 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 CCDC116Q8IYX3 515 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 MIER2Q8N344 545 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 NFAM1Q8NET5 270 aaPredicted RBP12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 OR14A16Q8NHC5 309 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 SUN3Q8TAQ9 357 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 RBM18Q96H35 190 aaKnown RBP12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 BBS4Q96RK4 519 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 PRPF18Q99633 342 aaKnown RBP12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 TUBB6Q9BUF5 446 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 CXorf21Q9HAI6 301 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 ZNF160Q9HCG1 818 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 TRIM33Q9UPN9 1127 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 MAN2B2Q9Y2E5 1009 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 CACNA1GO43497 2377 aa12.57□□□□□ -0.4
UBE2D3-221ENST00000507845 LOC400499M0QZD8 3231 aa12.56□□□□□ -0.4
UBE2D3-221ENST00000507845 ARGFXA6NJG6 315 aa12.56□□□□□ -0.4
UBE2D3-221ENST00000507845 C9JVG2 144 aa12.56□□□□□ -0.4
UBE2D3-221ENST00000507845 SLC22A3O75751 556 aa12.56□□□□□ -0.4
UBE2D3-221ENST00000507845 DDAH2O95865 285 aa12.56□□□□□ -0.4
UBE2D3-221ENST00000507845 TNNI3P19429 210 aa12.56□□□□□ -0.4
UBE2D3-221ENST00000507845 NT5EP21589 574 aa12.56□□□□□ -0.4
UBE2D3-221ENST00000507845 ZFP36L2P47974 494 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms