RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 AKAP13Q12802 2813 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 DYTNA2CJ06 578 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 A8MUA0 341 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 SNX3O60493 162 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 SHOX2O60902 331 aaPredicted RBP18.77■□□□□ 0.6
USP53-203ENST00000507597 COX6A1P12074 109 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 ITPKBP27987 946 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 ADSLP30566 484 aaPredicted RBP18.77■□□□□ 0.6
USP53-203ENST00000507597 GPC1P35052 558 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 NCBP2P52298 156 aaKnown RBP eCLIP18.77■□□□□ 0.66e-8■■■■■ 32.2
USP53-203ENST00000507597 CXADRP78310 365 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 MLC1Q15049 377 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 PCOLCEQ15113 449 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 SPRED3Q2MJR0 410 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 DCAF10Q5QP82 559 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 TMEM198Q66K66 360 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 PLAG1Q6DJT9 500 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 CGB2Q6NT52 195 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 JMJD6Q6NYC1 403 aaPredicted RBP18.77■□□□□ 0.6
USP53-203ENST00000507597 KBTBD2Q8IY47 623 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 CCDC116Q8IYX3 515 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 MMP21Q8N119 569 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 B3GNT7Q8NFL0 401 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 SNRNP27Q8WVK2 155 aaKnown RBP18.77■□□□□ 0.6
USP53-203ENST00000507597 CNRIP1Q96F85 164 aaPredicted RBP18.77■□□□□ 0.6
USP53-203ENST00000507597 ZNF681Q96N22 645 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 CLMPQ9H6B4 373 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 C5AR2Q9P296 337 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 CFL2Q9Y281 166 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 URB1O60287 2271 aaKnown RBP18.77■□□□□ 0.6
USP53-203ENST00000507597 NUP210LQ5VU65 1888 aa18.77■□□□□ 0.6
USP53-203ENST00000507597 A0A1W2PRB8 838 aa18.76■□□□□ 0.59
USP53-203ENST00000507597 MYO1GB0I1T2 1018 aa18.76■□□□□ 0.59
USP53-203ENST00000507597 SEC24DO94855 1032 aaPredicted RBP18.76■□□□□ 0.59
USP53-203ENST00000507597 FAM107AO95990 144 aa18.76■□□□□ 0.59
USP53-203ENST00000507597 IFI6P09912 130 aa18.76■□□□□ 0.59
USP53-203ENST00000507597 WT1P19544 449 aaPredicted RBP18.76■□□□□ 0.59
USP53-203ENST00000507597 KCNK10P57789 538 aa18.76■□□□□ 0.59
USP53-203ENST00000507597 SLC26A5P58743 744 aa18.76■□□□□ 0.59
USP53-203ENST00000507597 UFM1P61960 85 aa18.76■□□□□ 0.59
USP53-203ENST00000507597 MAP4K2Q12851 820 aa18.76■□□□□ 0.59
USP53-203ENST00000507597 DEFB109BQ30KR1 87 aa18.76■□□□□ 0.59
USP53-203ENST00000507597 BTBD16Q32M84 506 aa18.76■□□□□ 0.59
USP53-203ENST00000507597 GKAP1Q5VSY0 366 aaPredicted RBP18.76■□□□□ 0.59
USP53-203ENST00000507597 CPZQ66K79 652 aa18.76■□□□□ 0.59
USP53-203ENST00000507597 SHISA5Q8N114 240 aa18.76■□□□□ 0.59
USP53-203ENST00000507597 KRTCAP2Q8N6L1 136 aa18.76■□□□□ 0.59
USP53-203ENST00000507597 OR7G1Q8NGA0 311 aa18.76■□□□□ 0.59
USP53-203ENST00000507597 OR7A2PQ8NGA2 310 aa18.76■□□□□ 0.59
USP53-203ENST00000507597 C10orf82Q8WW14 230 aa18.76■□□□□ 0.59
USP53-203ENST00000507597 APOBEC4Q8WW27 367 aaKnown RBP18.76■□□□□ 0.59
USP53-203ENST00000507597 UCN3Q969E3 161 aa18.76■□□□□ 0.59
USP53-203ENST00000507597 VMP1Q96GC9 406 aa18.76■□□□□ 0.59
USP53-203ENST00000507597 CCT8L2Q96SF2 557 aa18.76■□□□□ 0.59
USP53-203ENST00000507597 RMND5AQ9H871 391 aa18.76■□□□□ 0.59
USP53-203ENST00000507597 ZNF160Q9HCG1 818 aa18.76■□□□□ 0.59
USP53-203ENST00000507597 NEUROD4Q9HD90 331 aa18.76■□□□□ 0.59
USP53-203ENST00000507597 RYDENQ9NUL5 291 aaKnown RBP18.76■□□□□ 0.59
USP53-203ENST00000507597 FAM120CQ9NX05 1096 aaKnown RBP18.76■□□□□ 0.59
USP53-203ENST00000507597 EXO1Q9UQ84 846 aaKnown RBP18.76■□□□□ 0.59
USP53-203ENST00000507597 FAM234BA2RU67 622 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 WASHC1A8K0Z3 465 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 ANKRD28O15084 1053 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 SERPINA7P05543 415 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 CLCN2P51788 898 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 PGDP52209 483 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 POLR2JP52435 117 aaKnown RBP18.75■□□□□ 0.59
USP53-203ENST00000507597 NME5P56597 212 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 MAPRE2Q15555 327 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 MSANTD1Q6ZTZ1 278 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 APLFQ8IW19 511 aaPredicted RBP18.75■□□□□ 0.59
USP53-203ENST00000507597 ANKS4BQ8N8V4 417 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 ZNF675Q8TD23 568 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 OR5P2Q8WZ92 322 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 PPWD1Q96BP3 646 aaKnown RBP18.75■□□□□ 0.59
USP53-203ENST00000507597 FBXL20Q96IG2 436 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 MARK4Q96L34 752 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 IMMP1LQ96LU5 166 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 ING2Q9H160 280 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 CXorf21Q9HAI6 301 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 C3orf14Q9HBI5 128 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 CPNE5Q9HCH3 593 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 MMP25Q9NPA2 562 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 TEKT2Q9UIF3 430 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 ARL2BPQ9Y2Y0 163 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 CLDN16Q9Y5I7 305 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 COPG1Q9Y678 874 aaKnown RBP18.75■□□□□ 0.59
USP53-203ENST00000507597 ACACAQ13085 2346 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 WDFY3Q8IZQ1 3526 aa18.75■□□□□ 0.59
USP53-203ENST00000507597 IGHV3-20A0A0C4DH32 117 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 PRSS51A0A1B0GVH4 220 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 ARGFXA6NJG6 315 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 TGFBR3LH3BV60 316 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 RNASET2O00584 256 aaKnown RBP18.74■□□□□ 0.59
USP53-203ENST00000507597 SLC22A2O15244 555 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 CFLARO15519 480 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 ITGB2P05107 769 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 PGRP06401 933 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 LAMP1P11279 417 aa18.74■□□□□ 0.59
USP53-203ENST00000507597 FRKP42685 505 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms