RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 CDHR1Q96JP9 859 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 SLC45A3Q96JT2 553 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 ACCSQ96QU6 501 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 COQ7Q99807 217 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 SPAG8Q99932 426 aaPredicted RBP2.8□□□□□ -1.96
LSM6-205ENST00000507449 OCR1Q9BZK8 76 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 HSD3B7Q9H2F3 369 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 THYN1Q9P016 225 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 MUTYHQ9UIF7 546 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 NUDCQ9Y266 331 aa2.8□□□□□ -1.96
LSM6-205ENST00000507449 PTPRUQ92729 1446 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 KRT87PA6NCN2 255 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 CFAP73A6NFT4 308 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 MEI4A8MW99 385 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 E9PQ18 207 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 CHEK1O14757 476 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 SH2D1BO14796 132 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 TSPAN2O60636 221 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 SYNGR4O95473 234 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 SEMA4FO95754 770 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 FCER2P06734 321 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 RNF224P0DH78 156 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 FOSL2P15408 326 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 CYP11B1P15538 503 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 RPA1P27694 616 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 PRDX6P30041 224 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 ALDH3B1P43353 468 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 ATXN3P54252 364 aaPredicted RBP2.79□□□□□ -1.96
LSM6-205ENST00000507449 RPS4XP62701 263 aaKnown RBP2.79□□□□□ -1.96
LSM6-205ENST00000507449 SRPXP78539 464 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 PAX8Q06710 450 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 GAMTQ14353 236 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 ECSCRQ19T08 205 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 CMPK2Q5EBM0 449 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 RHBDD2Q6NTF9 364 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 STEAP1BQ6NZ63 245 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 NEK5Q6P3R8 708 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 GPRIN3Q6ZVF9 776 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 MIER3Q7Z3K6 550 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 NUFIP2Q7Z417 695 aaKnown RBP2.79□□□□□ -1.96
LSM6-205ENST00000507449 CCDC71Q8IV32 467 aaPredicted RBP2.79□□□□□ -1.96
LSM6-205ENST00000507449 PHC2Q8IXK0 858 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 ABHD12Q8N2K0 398 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 HDDC3Q8N4P3 179 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 OR1B1Q8NGR6 318 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 TMEM45BQ96B21 275 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 RBM4BQ9BQ04 359 aaKnown RBP2.79□□□□□ -1.96
LSM6-205ENST00000507449 EGLN1Q9GZT9 426 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 TUBB1Q9H4B7 451 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 NT5DC2Q9H857 520 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 MOB1AQ9H8S9 216 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 GNB4Q9HAV0 340 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 SPATA2Q9UM82 520 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 PIN4Q9Y237 131 aaKnown RBP2.79□□□□□ -1.96
LSM6-205ENST00000507449 KLF2Q9Y5W3 355 aaPredicted RBP2.79□□□□□ -1.96
LSM6-205ENST00000507449 MYH15Q9Y2K3 1946 aa2.79□□□□□ -1.96
LSM6-205ENST00000507449 FAM205AQ6ZU69 1335 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 IGKV3D-15A0A087WSY6 115 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 RNF103-CHMP3A0A140T963 221 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 A0A1B0GU03 582 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 TMCO5BA8MYB1 307 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 PRPSAP2O60256 369 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 DUSP11O75319 330 aaKnown RBP2.78□□□□□ -1.96
LSM6-205ENST00000507449 POP4O95707 220 aaKnown RBP2.78□□□□□ -1.96
LSM6-205ENST00000507449 TGFAP01135 160 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 KRT5P13647 590 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 ETS1P14921 441 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 OXTRP30559 389 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 ACADSBP45954 432 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 SLC1A6P48664 564 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 NDST1P52848 882 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 FUT7Q11130 342 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 FASTKQ14296 549 aaKnown RBP2.78□□□□□ -1.96
LSM6-205ENST00000507449 ZKSCAN8Q15776 578 aaPredicted RBP2.78□□□□□ -1.96
LSM6-205ENST00000507449 CLPPQ16740 277 aaPredicted RBP2.78□□□□□ -1.96
LSM6-205ENST00000507449 UNC50Q53HI1 259 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 MUC21Q5SSG8 566 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 C1orf189Q5VU69 101 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 LIPKQ5VXJ0 399 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 HIST2H2AA3Q6FI13 130 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 PAQR6Q6TCH4 344 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 ISLR2Q6UXK2 745 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 CDHR3Q6ZTQ4 885 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 GPR142Q7Z601 462 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 TAF8Q7Z7C8 310 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 YRDCQ86U90 279 aaKnown RBP2.78□□□□□ -1.96
LSM6-205ENST00000507449 ZNF781Q8N8C0 355 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 ZNF491Q8N8L2 437 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 BANPQ8N9N5 519 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 NPRL2Q8WTW4 380 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 TAF15Q92804 592 aaKnown RBP eCLIP2.78□□□□□ -1.96
LSM6-205ENST00000507449 NTNG2Q96CW9 530 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 SAMD8Q96LT4 415 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 ZNF597Q96LX8 424 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 DEFB118Q96PH6 123 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 CBWD1Q9BRT8 395 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 CHCHD5Q9BSY4 110 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 TRIM15Q9C019 465 aa2.78□□□□□ -1.96
LSM6-205ENST00000507449 STRADBQ9C0K7 418 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms