RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 TRBC2A0A5B9 178 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 TMEM114B3SHH9 223 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 SLCO1B7G3V0H7 640 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 H3BNH8 94 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 MASP2O00187 686 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 P2RX6O15547 441 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 ALOX12BO75342 701 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 KLHL18O94889 574 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 DDAH2O95865 285 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 KRT6AP02538 564 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 KRT6BP04259 564 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 SLC35G6P0C7Q6 338 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 PRR35P0CG20 571 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 C8orf89P0DMQ9 161 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 GP1BBP13224 206 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 ZNF37AP17032 561 aaPredicted RBP7.55□□□□□ -1.2
SCN1A-207ENST00000507401 JAK1P23458 1154 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 DCKP27707 260 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 AHRP35869 848 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 GLRBP48167 497 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 AQP5P55064 265 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 SKP1P63208 163 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 POU4F1Q01851 419 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 CSHL1Q14406 222 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 PPP1R3AQ16821 1122 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 CDKL4Q5MAI5 379 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 SLX4IPQ5VYV7 408 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 C16orf87Q6PH81 154 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 TMEM207Q6UWW9 146 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 MBOAT1Q6ZNC8 495 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 SH2D5Q6ZV89 423 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 CUZD1Q86UP6 607 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 ZC3H7AQ8IWR0 971 aaKnown RBP7.55□□□□□ -1.2
SCN1A-207ENST00000507401 PEX5LQ8IYB4 626 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 PRSS58Q8IYP2 241 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 AFAP1L2Q8N4X5 818 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 CISD2Q8N5K1 135 aaKnown RBP7.55□□□□□ -1.2
SCN1A-207ENST00000507401 METTL25Q8N6Q8 603 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 PCYOX1LQ8NBM8 494 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 PLPP5Q8NEB5 264 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 OR9A4Q8NGU2 314 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 METTL21AQ8WXB1 218 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 CDKL2Q92772 493 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 C8orf44Q96CB5 159 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 C19orf60Q96EN9 201 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 OR4K3Q96R72 315 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 PRPF18Q99633 342 aaKnown RBP7.55□□□□□ -1.2
SCN1A-207ENST00000507401 ANKRD60Q9BZ19 345 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 WDR12Q9GZL7 423 aaKnown RBP7.55□□□□□ -1.2
SCN1A-207ENST00000507401 RHOJQ9H4E5 214 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 INIPQ9NRY2 104 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 ASF1BQ9NVP2 202 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 SELENONQ9NZV5 590 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 C19orf25Q9UFG5 118 aaPredicted RBP7.55□□□□□ -1.2
SCN1A-207ENST00000507401 IFT52Q9Y366 437 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 KCNE2Q9Y6J6 123 aa7.55□□□□□ -1.2
SCN1A-207ENST00000507401 DOPEY2Q9Y3R5 2298 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 hCG_2014768A0A024R1R8 64 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 FAM95CA0A1B0GW59 222 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 FEZF1A0PJY2 475 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 WIPF3A6NGB9 483 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 URADA6NGE7 173 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 TRIM64A6NGJ6 449 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 FAM47E-STBD1D6RA91 191 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 TGFBR3LH3BV60 316 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 TPD52L2O43399 206 aaKnown RBP7.54□□□□□ -1.2
SCN1A-207ENST00000507401 OR1F1O43749 312 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 SULT1C4O75897 302 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 OR6B1O95007 311 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 STAMBPO95630 424 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 GUCA1CO95843 209 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 SERPINE1P05121 402 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 BPGMP07738 259 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 CDH1P12830 882 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 BGNP21810 368 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 UQCRFS1P47985 274 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 AGTR2P50052 363 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 TMBIM6P55061 237 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 TAS2R39P59534 338 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 MYBPC1Q00872 1141 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 MEF2AQ02078 507 aaPredicted RBP7.54□□□□□ -1.2
SCN1A-207ENST00000507401 BST1Q10588 318 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 TRAP1Q12931 704 aaKnown RBP7.54□□□□□ -1.2
SCN1A-207ENST00000507401 KRR1Q13601 381 aaKnown RBP7.54□□□□□ -1.2
SCN1A-207ENST00000507401 ZNF169Q14929 603 aaPredicted RBP7.54□□□□□ -1.2
SCN1A-207ENST00000507401 PCOLCEQ15113 449 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 PRR30Q53SZ7 412 aaPredicted RBP7.54□□□□□ -1.2
SCN1A-207ENST00000507401 UBAP2Q5T6F2 1119 aaKnown RBP7.54□□□□□ -1.2
SCN1A-207ENST00000507401 PPP4R4Q6NUP7 873 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 H3F3CQ6NXT2 135 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 C20orf204Q6ZNR8 217 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 LINC00696Q6ZRV3 163 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 NANOGNBQ7Z5D8 188 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 CPEB2Q7Z5Q1 589 aaKnown RBP7.54□□□□□ -1.2
SCN1A-207ENST00000507401 ADAMTSL2Q86TH1 951 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 CARM1Q86X55 608 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 CHERPQ8IWX8 916 aaKnown RBP7.54□□□□□ -1.2
SCN1A-207ENST00000507401 KLHDC8AQ8IYD2 350 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 KCT2Q8NC54 265 aa7.54□□□□□ -1.2
SCN1A-207ENST00000507401 TRPV3Q8NET8 790 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms