RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 C15orf32Q32M92 178 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 C2orf76Q3KRA6 126 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 NHLRC3Q5JS37 347 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 WDR25Q64LD2 544 aaPredicted RBP3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 SPINK14Q6IE38 97 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 ARMCX5Q6P1M9 558 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 RFWD3Q6PCD5 774 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 HIPK1Q86Z02 1210 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 LRRC49Q8IUZ0 686 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 LINC00518Q8N0U6 118 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 SLC39A11Q8N1S5 342 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 COG3Q96JB2 828 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 RPGRIP1Q96KN7 1286 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 GPR137Q96N19 417 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 SPATA13Q96N96 652 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 SPAG8Q99932 426 aaPredicted RBP3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 ABCG4Q9H172 646 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 IL1RL2Q9HB29 575 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 KCNMB3Q9NPA1 279 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 PIGVQ9NUD9 493 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 ACOXLQ9NUZ1 547 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 CYP39A1Q9NYL5 469 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 TAS2R16Q9NYV7 291 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 NDUFA13Q9P0J0 144 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 TSPAN16Q9UKR8 245 aa3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 MRPL11Q9Y3B7 192 aaKnown RBP3.16□□□□□ -1.9
TOPBP1-204ENST00000505804 DHX29Q7Z478 1369 aaKnown RBP3.15□□□□□ -1.9
TOPBP1-204ENST00000505804 GON4LQ3T8J9 2241 aa3.15□□□□□ -1.9
TOPBP1-204ENST00000505804 A0A087WWV3 80 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 A0A0U1RQG5 324 aaPredicted RBP3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 CCDC69A6NI79 296 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 TLR4O00206 839 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 TSPAN2O60636 221 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 CXCL14O95715 111 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 PNPP00491 289 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 P4HA1P13674 534 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 AREGP15514 252 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 ACADSBP45954 432 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 NSFP46459 744 aaKnown RBP3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 PITPNBP48739 271 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 CNN1P51911 297 aaKnown RBP3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 RPS4XP62701 263 aaKnown RBP3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 GSTO1P78417 241 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 PPP2R5CQ13362 524 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 UNC50Q53HI1 259 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 REP15Q6BDI9 236 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 RAPH1Q70E73 1250 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 HPS6Q86YV9 775 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 KIAA1524Q8TCG1 905 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 FBXO25Q8TCJ0 367 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 NTNG2Q96CW9 530 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 RAB39BQ96DA2 213 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 CAPNS2Q96L46 248 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 C1orf147Q96MC9 270 aaPredicted RBP3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 ACAT2Q9BWD1 397 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 ZNF446Q9NWS9 450 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 GPR83Q9NYM4 423 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 AKAP7Q9P0M2 348 aaPredicted RBP3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 VPS54Q9P1Q0 977 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 RCOR3Q9P2K3 495 aaPredicted RBP3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 MRPS2Q9Y399 296 aaKnown RBP3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 HCFC1P51610 2035 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 RALGAPA1Q6GYQ0 2036 aa3.15□□□□□ -1.91
TOPBP1-204ENST00000505804 MACROD2A1Z1Q3 448 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 RNF212BA8MTL3 300 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 E9PAM4 449 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 EEF2KO00418 725 aaKnown RBP3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 BCL2L11O43521 198 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 SRSF10O75494 262 aaKnown RBP3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 OLFM2O95897 454 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 FCER2P06734 321 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 FAM200BP0CF97 657 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 FCARP24071 287 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 CALML3P27482 149 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 COPB2P35606 906 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 TRIM23P36406 574 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 ELK3P41970 407 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 ZNF131P52739 623 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 KRTAP10-5P60370 271 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 ARF5P84085 180 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 CBX3Q13185 183 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 EXOSC7Q15024 291 aaKnown RBP3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 ANKRD55Q3KP44 614 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 GPAT3Q53EU6 434 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 VWA2Q5GFL6 755 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 SLC10A5Q5PT55 438 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 SLC25A30Q5SVS4 291 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 LCE3CQ5T5A8 94 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 DDI2Q5TDH0 399 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 PRAMEF7Q5VXH5 474 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 LIPJQ5W064 366 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 STEAP1BQ6NZ63 245 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 CDC42EP5Q6NZY7 148 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 ZNF491Q8N8L2 437 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 SUMF1Q8NBK3 374 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 OR6T1Q8NGN1 323 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 RAB3CQ96E17 227 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 DTD2Q96FN9 168 aa3.14□□□□□ -1.91
TOPBP1-204ENST00000505804 PNNQ9H307 717 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms