RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 A0A0G2JN53 185 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 A0A0G2JPF8 293 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 A0A0J9YY10 115 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 A0A1W2PPC4 97 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 HNRNPCL2B2RXH8 293 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 HNRNPCL3B7ZW38 293 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 CASC3O15234 703 aaKnown RBP16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 B3GALT2O43825 422 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 HNRNPCL4P0DMR1 293 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 NR2F1P10589 423 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 CHRNB1P11230 501 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 IL7RP16871 459 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 CASP9P55211 416 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 CDH12P55289 794 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 BTN3A2P78410 334 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 IL1RL1Q01638 556 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 LRIT3Q3SXY7 679 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 FBXO42Q6P3S6 717 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 CLVS1Q8IUQ0 354 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 FAM20CQ8IXL6 584 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 SPARTQ8N0X7 666 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 SVOPQ8N4V2 548 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 TMIGD2Q96BF3 282 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 ISOC1Q96CN7 298 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 MPP4Q96JB8 637 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 DHRS1Q96LJ7 313 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 BCL7BQ9BQE9 202 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 NTMQ9P121 344 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 SEC14L3Q9UDX4 400 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 NDRG2Q9UN36 371 aaKnown RBP16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 SH3GLB1Q9Y371 365 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 ATG2BQ96BY7 2078 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 GSAPA4D1B5 854 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 OR6C74A6NCV1 312 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 DUXAA6NLW8 204 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 C4orf51C9J302 202 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 SCAMP1O15126 338 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 PPM1DO15297 605 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 B4GALT2O60909 372 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 ERAL1O75616 437 aaKnown RBP16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 SEC14L2O76054 403 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 RPP38P78345 283 aaKnown RBP16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 PMS2P3Q13401 168 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 SIM2Q14190 667 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 MAD2L1BPQ15013 274 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 MLIPQ5VWP3 458 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 ANKRD34AQ69YU3 496 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 RNF44Q7L0R7 432 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 PARGQ86W56 976 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 TAGAPQ8N103 731 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 GJD3Q8N144 294 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 SLC22A18ASQ8N1D0 253 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 TSTD1Q8NFU3 115 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 CNRIP1Q96F85 164 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 GAS2L1Q99501 681 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 FEVQ99581 238 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 MAPKAP1Q9BPZ7 522 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 TMEM121BQ9BXQ6 578 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 UBE2ZQ9H832 354 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 ACER3Q9NUN7 267 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 TMCC3Q9ULS5 477 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 SLC9A8Q9Y2E8 581 aa16.31■□□□□ 0.2
TRAPPC11-204ENST00000505676 AXIN1O15169 862 aa16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 NARSO43776 548 aaKnown RBP16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 THEGLP0DJG4 465 aa16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 CTSEP14091 401 aa16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 MAGP20916 626 aa16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 SLC5A2P31639 672 aa16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 GGT2P36268 569 aa16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 RAB8AP61006 207 aa16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 EIF2B5Q13144 721 aaKnown RBP16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 EXOC3L2Q2M3D2 409 aa16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 OOSP2Q86WS3 158 aa16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 BAHD1Q8TBE0 780 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 FKBP10Q96AY3 582 aa16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 KLHDC7BQ96G42 594 aa16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 ZNF681Q96N22 645 aa16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 TREX2Q9BQ50 279 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 DUSP21Q9H596 190 aa16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 PNMA8BQ9ULN7 279 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 CYP8B1Q9UNU6 501 aa16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 PGRMC2O15173 223 aa16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 MPZL2O60487 215 aa16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 NDUFS2O75306 463 aa16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 ZNF888P0CJ79 500 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 OR12D1P0DN82 309 aa16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 HOXB3P14651 431 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 YAP1P46937 504 aaKnown RBP16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 OR1E2P47887 323 aa16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 MAPK10P53779 464 aa16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 RPS26P62854 115 aaKnown RBP16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 SMYD1Q8NB12 490 aa16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 TTYH1Q9H313 450 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 TRPC4Q9UBN4 977 aa16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 ACAD8Q9UKU7 415 aa16.3■□□□□ 0.2
TRAPPC11-204ENST00000505676 SYT5O00445 386 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 ADAP00813 363 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 POLR2CP19387 275 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 CPN2P22792 545 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 POLR2IP36954 125 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms