RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), human

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GYPB-205	ENST00000505583	DUSP8	Q13202	625 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	SLAMF1	Q13291	335 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	SERTAD2	Q14140	314 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	PDK4	Q16654	411 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	SLC25A35	Q3KQZ1	300 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	ACSF3	Q4G176	576 aa	Predicted RBP	5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	DCST1	Q5T197	706 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	RIPPLY2	Q5TAB7	128 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	FNDC7	Q5VTL7	733 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	GPSM1	Q86YR5	675 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	KRTAP1-3	Q8IUG1	177 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	LAS2	Q8IYD9	372 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	ULK2	Q8IYT8	1036 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	FBXW8	Q8N3Y1	598 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	PDPR	Q8NCN5	879 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	BBOF1	Q8ND07	529 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	FAM13C	Q8NE31	585 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	WFDC11	Q8NEX6	87 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	OR7G3	Q8NG95	312 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	OR5L2	Q8NGL0	311 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	NEIL3	Q8TAT5	605 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	NUBPL	Q8TB37	319 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	NINJ1	Q92982	152 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	LRRC39	Q96DD0	335 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	SPACA9	Q96E40	222 aa	Predicted RBP	5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	FBXL20	Q96IG2	436 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	UBXN10	Q96LJ8	280 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	JSRP1	Q96MG2	331 aa	Predicted RBP	5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	DOCK7	Q96N67	2140 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	KCNC2	Q96PR1	638 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	GAL3ST4	Q96RP7	486 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	TIMP4	Q99727	224 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	TBCD	Q9BTW9	1192 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	ERVK-6	Q9BXR3	956 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	CAPS2	Q9BXY5	557 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	ZNF717	Q9BY31	904 aa	Predicted RBP	5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	CD244	Q9BZW8	370 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	PITHD1	Q9GZP4	211 aa	Predicted RBP	5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	EXO5	Q9H790	373 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	RPF2	Q9H7B2	306 aa	Known RBP	5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	POPDC3	Q9HBV1	291 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	ZFP64	Q9NPA5	681 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	CD274	Q9NZQ7	290 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	CNOT11	Q9UKZ1	510 aa	Known RBP	5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	ERVK-19	Q9WJR5	959 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	SLC6A5	Q9Y345	797 aa		5.37	□□□□□ -1.55
GYPB-205	ENST00000505583	MED12	Q93074	2177 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	VPS13C	Q709C8	3753 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	C15orf38-AP3S2	A0A0A6YYH1	394 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583		A0A1W2PR48	441 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	TCRBV9S1A1T	A0A576	114 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	LRRC14B	A6NHZ5	514 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	UBXN8	O00124	270 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	CES2	O00748	559 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	PLPP1	O14494	284 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	TMPRSS11D	O60235	418 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	TRIM3	O75382	744 aa	Predicted RBP	5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	EED	O75530	441 aa	Known RBP	5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	ACSL3	O95573	720 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	EPPIN	O95925	133 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	CT62	P0C5K7	136 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	SLC35E2B	P0CK96	405 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	MTHFD2	P13995	350 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	GABRA1	P14867	456 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	TACR1	P25103	407 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	SSTR4	P31391	388 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	CEACAM8	P31997	349 aa	Predicted RBP	5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	SSR2	P43308	183 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	SLCO1A2	P46721	670 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	ARL4C	P56559	192 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	SLC37A1	P57057	533 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	FBXW4	P57775	412 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	DR1	Q01658	176 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	POU4F1	Q01851	419 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	TNFRSF17	Q02223	184 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	TGM3	Q08188	693 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	DDX39B	Q13838	428 aa	Known RBP	5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	RCN2	Q14257	317 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	ZNF267	Q14586	743 aa	Predicted RBP	5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	EBP	Q15125	230 aa	Known RBP	5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	ZKSCAN8	Q15776	578 aa	Predicted RBP	5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	TBCC	Q15814	346 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	NTRK2	Q16620	822 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	AP5B1	Q2VPB7	878 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	FBXL19-AS1	Q494R0	122 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	FLYWCH1	Q4VC44	716 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	DEPDC1	Q5TB30	811 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	KHDRBS2	Q5VWX1	349 aa	Known RBP	5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	FAM219B	Q5XKK7	198 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	OR4C11	Q6IEV9	310 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	SULT1C3	Q6IMI6	304 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	MED27	Q6P2C8	311 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	PLXDC2	Q6UX71	529 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	PAMR1	Q6UXH9	720 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	CMC1	Q7Z7K0	106 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	ISCA2	Q86U28	154 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	GPR180	Q86V85	440 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	CREG2	Q8IUH2	290 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	ZBED8	Q8IZ13	594 aa		5.36	□□□□□ -1.55
GYPB-205	ENST00000505583	TCAIM	Q8N3R3	496 aa		5.36	□□□□□ -1.55

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