RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 PAX5Q02548 391 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 GLO1Q04760 184 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 LSM12Q3MHD2 195 aaKnown RBP4.85□□□□□ -1.63
NIPBL-204ENST00000504430 IL23RQ5VWK5 629 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 NKAIN2Q5VXU1 208 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 TMEM268Q5VZI3 342 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 CLEC6AQ6EIG7 209 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 NIPA1Q7RTP0 329 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 LINC01356Q8N9X3 169 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 ZG16BQ96DA0 208 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 B3GALT6Q96L58 329 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 OR6C1Q96RD1 312 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 CTRCQ99895 268 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 CENPKQ9BS16 269 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 LMF2Q9BU23 707 aaKnown RBP4.85□□□□□ -1.63
NIPBL-204ENST00000504430 GPR174Q9BXC1 333 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 POLDIP3Q9BY77 421 aaKnown RBP4.85□□□□□ -1.63
NIPBL-204ENST00000504430 SLC6A17Q9H1V8 727 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 CLK4Q9HAZ1 481 aaKnown RBP4.85□□□□□ -1.63
NIPBL-204ENST00000504430 IMP3Q9NV31 184 aaKnown RBP4.85□□□□□ -1.63
NIPBL-204ENST00000504430 EMCNQ9ULC0 261 aa4.85□□□□□ -1.63
NIPBL-204ENST00000504430 TMEM202A6NGA9 273 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 UNC119BA6NIH7 251 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 GOLGA6L19H0YKK7 550 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 ZBTB5O15062 677 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 LYNP07948 512 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 DARSP14868 501 aaKnown RBP4.84□□□□□ -1.63
NIPBL-204ENST00000504430 DUSP1P28562 367 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 ALDH3A1P30838 453 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 CCZ1BP86790 482 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 CCZ1P86791 482 aaPredicted RBP4.84□□□□□ -1.63
NIPBL-204ENST00000504430 ZNF691Q5VV52 312 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 AGAP6Q5VW22 663 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 LIPJQ5W064 366 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 CBWD2Q8IUF1 395 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 D2HGDHQ8N465 521 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 SPEM1Q8N4L4 309 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 PLEKHA8Q96JA3 519 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 CIB1Q99828 191 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 CCDC3Q9BQI4 270 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 CBWD1Q9BRT8 395 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 MLXIPLQ9NP71 852 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 PRSS16Q9NQE7 514 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 SLC2A8Q9NY64 477 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 NAGKQ9UJ70 344 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 PRSS51A0A1B0GVH4 220 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 HHLA1C9JL84 531 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 KLRC4-KLRK1H3BQV0 150 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 EEF1B2P24534 225 aaKnown RBP4.84□□□□□ -1.63
NIPBL-204ENST00000504430 HMGCLP35914 325 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 MAGEA9P43362 315 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 HLCSP50747 726 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 NR0B1P51843 470 aaKnown RBP4.84□□□□□ -1.63
NIPBL-204ENST00000504430 IRX4P78413 519 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 CDK16Q00536 496 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 TTMPQ5BVD1 217 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 C6orf10Q5SRN2 563 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 LYSMD4Q5XG99 296 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 RTL4Q6ZR62 310 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 LRRC55Q6ZSA7 311 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 ZNF546Q86UE3 836 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 PRSS58Q8IYP2 241 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 ZNF611Q8N823 705 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 KBTBD3Q8NAB2 608 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 TMEM104Q8NE00 496 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 OR51G2Q8NGK0 314 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 TEX47Q8TBZ9 253 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 ACOT11Q8WXI4 607 aaPredicted RBP4.84□□□□□ -1.63
NIPBL-204ENST00000504430 RND1Q92730 232 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 FKBP10Q96AY3 582 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 PELI1Q96FA3 418 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 MBOAT7Q96N66 472 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 HSD17B14Q9BPX1 270 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 C17orf62Q9BQA9 187 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 MSTO1Q9BUK6 570 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 DRC3Q9H069 523 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 LRMDAQ9H2I8 198 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 NARFLQ9H6Q4 476 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 FOLH1BQ9HBA9 442 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 PCMTD2Q9NV79 361 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 PARPBPQ9NWS1 579 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 MAD1L1Q9Y6D9 718 aa4.84□□□□□ -1.63
NIPBL-204ENST00000504430 RNF222A6NCQ9 220 aa4.84□□□□□ -1.64
NIPBL-204ENST00000504430 PGRMC1O00264 195 aaKnown RBP4.84□□□□□ -1.64
NIPBL-204ENST00000504430 SSX4O60224 188 aa4.84□□□□□ -1.64
NIPBL-204ENST00000504430 RAD51DO75771 328 aa4.84□□□□□ -1.64
NIPBL-204ENST00000504430 BMP10O95393 424 aa4.84□□□□□ -1.64
NIPBL-204ENST00000504430 CASP14P31944 242 aa4.84□□□□□ -1.64
NIPBL-204ENST00000504430 CDKN2CP42773 168 aa4.84□□□□□ -1.64
NIPBL-204ENST00000504430 MNAT1P51948 309 aa4.84□□□□□ -1.64
NIPBL-204ENST00000504430 EMP2P54851 167 aa4.84□□□□□ -1.64
NIPBL-204ENST00000504430 CDK3Q00526 305 aa4.84□□□□□ -1.64
NIPBL-204ENST00000504430 PTGISQ16647 500 aa4.84□□□□□ -1.64
NIPBL-204ENST00000504430 ANXA2RQ3ZCQ2 193 aa4.84□□□□□ -1.64
NIPBL-204ENST00000504430 TMEM52BQ4KMG9 183 aa4.84□□□□□ -1.64
NIPBL-204ENST00000504430 ACTBL2Q562R1 376 aa4.84□□□□□ -1.64
NIPBL-204ENST00000504430 LCE2AQ5TA79 106 aaPredicted RBP4.84□□□□□ -1.64
NIPBL-204ENST00000504430 KCNMB4Q86W47 210 aa4.84□□□□□ -1.64
NIPBL-204ENST00000504430 C12orf76Q8N812 135 aaPredicted RBP4.84□□□□□ -1.64
NIPBL-204ENST00000504430 POC1AQ8NBT0 407 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms