RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 UQCRC2P22695 453 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC6A2P23975 617 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 IL1R2P27930 398 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 HTR1BP28222 390 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 MATKP42679 507 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 WASP42768 502 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 KCNJ3P48549 501 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 GZMKP49863 264 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ITGA1P56199 1179 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SMAD3P84022 425 aaKnown RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 FADDQ13158 208 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 MAD2L1Q13257 205 aaPredicted RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ADPRMQ3LIE5 342 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 TMEM35AQ53FP2 167 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 TEX44Q53QW1 395 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 CELF3Q5SZQ8 465 aaKnown RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 HES5Q5TA89 166 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 HECTD2Q5U5R9 776 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 FDX2Q6P4F2 183 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF549Q6P9A3 640 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 BHLHB9Q6PI77 547 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 AMIGO1Q86WK6 493 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 TMEM192Q8IY95 271 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 EIF4E3Q8N5X7 224 aaKnown RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 RTL3Q8N8U3 475 aaKnown RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 C1orf127Q8N9H9 656 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 CHST14Q8NCH0 376 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 DNERQ8NFT8 737 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 OR4L1Q8NH43 312 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 OR8K5Q8NH50 307 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 RHOXF1Q8NHV9 184 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 CPNE4Q96A23 557 aaPredicted RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF775Q96BV0 537 aaPredicted RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF514Q96K75 400 aaPredicted RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 COL21A1Q96P44 957 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 UHRF1Q96T88 793 aaPredicted RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 MTERF1Q99551 399 aaKnown RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 PKP2Q99959 881 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 NFKBIZQ9BYH8 718 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 BHLHE41Q9C0J9 482 aaPredicted RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ZFP64Q9NPA5 681 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 RCC2Q9P258 522 aaKnown RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ASH2LQ9UBL3 628 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 CD84Q9UIB8 345 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 PURGQ9UJV8 347 aaKnown RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF490Q9ULM2 529 aaPredicted RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 PRPF19Q9UMS4 504 aaKnown RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 TP53TG5Q9Y2B4 290 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 DOCK5Q9H7D0 1870 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ATG2AQ2TAZ0 1938 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 A0A087X1B8 175 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 A0A1W2PRG6 482 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 MEIOCA2RUB1 952 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 TBC1D3BA6NDS4 549 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ACOT8O14734 319 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 RGS10O43665 173 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC28A2O43868 658 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 CNMDO75829 334 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 LRIG2O94898 1065 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 KDM4BO94953 1096 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC25A14O95258 325 aaPredicted RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 STATHP02808 62 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 DHRS4L1P0CG22 281 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 IL7RP16871 459 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 BMP7P18075 431 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 WARSP23381 471 aaKnown RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 DGKAP23743 735 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 LMO2P25791 158 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 GIFP27352 417 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 CSNK1DP48730 415 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 NOVP48745 357 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC11A1P49279 550 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 TMBIM6P55061 237 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 CDH12P55289 794 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 MC1RQ01726 317 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 NAE1Q13564 534 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 NPY5RQ15761 445 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SNAPC1Q16533 368 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 UGT8Q16880 541 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 FAM174BQ3ZCQ3 159 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF805Q5CZA5 627 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 RABL3Q5HYI8 236 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 FAM76BQ5HYJ3 339 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 C9orf152Q5JTZ5 239 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 MPP7Q5T2T1 576 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF697Q5TEC3 545 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 SLC39A5Q6ZMH5 540 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ZNF574Q6ZN55 896 aaPredicted RBP3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 DPY19L3Q6ZPD9 716 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 NUDT18Q6ZVK8 323 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 ANKRD33Q7Z3H0 272 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 GALNTL5Q7Z4T8 443 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 P2RY8Q86VZ1 359 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 PAQR7Q86WK9 346 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 XYLT1Q86Y38 959 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 BANPQ8N9N5 519 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 KBTBD8Q8NFY9 601 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 HM13Q8TCT9 377 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 S100ZQ8WXG8 99 aa3.51□□□□□ -1.85
PCDH11X-208ENST00000504220 FBXL20Q96IG2 436 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms