RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 KCTD3Q9Y597 815 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 DUXAA6NLW8 204 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 LGALS16A8MUM7 142 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 HCRTR2O43614 444 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 BMP7P18075 431 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 WNT5AP41221 380 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 ETV4P43268 484 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 TCL1AP56279 114 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 GRB10Q13322 594 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 RCAN2Q14206 197 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 ESRP1Q6NXG1 681 aaKnown RBP5.99□□□□□ -1.45
CLCN3-204ENST00000504131 LYPD8Q6UX82 237 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 TMPRSS11AQ6ZMR5 421 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 RETREG3Q86VR2 466 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 ZDHHC14Q8IZN3 488 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 TCP10LQ8TDR4 215 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 TSEN15Q8WW01 171 aaKnown RBP5.99□□□□□ -1.45
CLCN3-204ENST00000504131 C1orf54Q8WWF1 131 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 PIWIL1Q96J94 861 aaKnown RBP5.99□□□□□ -1.45
CLCN3-204ENST00000504131 ALKBH7Q9BT30 221 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-204ENST00000504131 PBDC1Q9BVG4 233 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 NMUR1Q9HB89 426 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 COPS7AQ9UBW8 275 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 ERVW-1Q9UQF0 538 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 MYOCOSA0A1B0GUC4 107 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 CBX4O00257 560 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 INSIG1O15503 277 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 AIREO43918 545 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 RDH16O75452 317 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 ARAFP10398 606 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 CHRNA4P43681 627 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 ARG2P78540 354 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 NFATC2Q13469 925 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 CCNIQ14094 377 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 FCN2Q15485 313 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 ZNF699Q32M78 642 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 SBK1Q52WX2 424 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 SLC29A4Q7RTT9 530 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 YIPF7Q8N8F6 280 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 OR10D4PQ8NGN7 298 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 C14orf79Q96F83 325 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 DDA1Q9BW61 102 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 RNF26Q9BY78 433 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-204ENST00000504131 MAGEH1Q9H213 219 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 CNTD2Q9H8S5 307 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 SMCO4Q9NRQ5 59 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 GPR173Q9NS66 373 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 ASF1AQ9Y294 204 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 DIP2AQ14689 1571 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 ABCB11O95342 1321 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 H3BMQ9 156 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 TRAFD1O14545 582 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-204ENST00000504131 CBX7O95931 251 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 GPIP06744 558 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 CNPP09543 421 aaKnown RBP5.99□□□□□ -1.45
CLCN3-204ENST00000504131 PFKLP17858 780 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 PTSQ03393 145 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 ZNF273Q14593 569 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 EIF4HQ15056 248 aaKnown RBP5.99□□□□□ -1.45
CLCN3-204ENST00000504131 TAF9Q16594 264 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 SLC5A12Q1EHB4 618 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.99□□□□□ -1.45
CLCN3-204ENST00000504131 NCR3LG1Q68D85 454 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 EFCAB12Q6NXP0 572 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 GAREM2Q75VX8 874 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 CLNKQ7Z7G1 428 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 ENTHD1Q8IYW4 607 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 RNFT2Q96EX2 444 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 MMABQ96EY8 250 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-204ENST00000504131 NACC1Q96RE7 527 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 THAP2Q9H0W7 228 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 ZNF385DQ9H6B1 395 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 MTHFD2LQ9H903 347 aaPredicted RBP5.99□□□□□ -1.45
CLCN3-204ENST00000504131 SLC52A2Q9HAB3 445 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 AGO4Q9HCK5 861 aaKnown RBP5.99□□□□□ -1.45
CLCN3-204ENST00000504131 C6orf50Q9HD87 102 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 TMEM39AQ9NV64 488 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 FOXJ2Q9P0K8 574 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 KIF25Q9UIL4 384 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 BTNL2Q9UIR0 455 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 ANKRD26Q9UPS8 1709 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 MRPS2Q9Y399 296 aaKnown RBP5.99□□□□□ -1.45
CLCN3-204ENST00000504131 NUBP2Q9Y5Y2 271 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 C3P01024 1663 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 RAD17O75943 681 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 OR2J2O76002 312 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 GYPCP04921 128 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 CD72P21854 359 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 HLA-DMAP28067 261 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 ADRA1BP35368 520 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 CKS1BP61024 79 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 TMEM119Q4V9L6 283 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 TSTD2Q5T7W7 516 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 PRAMEF8Q5VWM4 474 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 PRAMEF7Q5VXH5 474 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 C3P1Q6ZMU1 363 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 ADHFE1Q8IWW8 467 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 FAM58AQ8N1B3 248 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 TMEM130Q8N3G9 435 aa5.99□□□□□ -1.45
CLCN3-204ENST00000504131 PPM1KQ8N3J5 372 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms