RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 UGT2B28Q9BY64 529 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 PLA2G12AQ9BZM1 189 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 OPN3Q9H1Y3 402 aaPredicted RBP3.31□□□□□ -1.88
USP46-205ENST00000504078 CHODLQ9H9P2 273 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 NHEJ1Q9H9Q4 299 aaPredicted RBP3.31□□□□□ -1.88
USP46-205ENST00000504078 ADAP2Q9NPF8 381 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 SIRT5Q9NXA8 310 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 UTP6Q9NYH9 597 aaKnown RBP3.31□□□□□ -1.88
USP46-205ENST00000504078 MOCS1Q9NZB8 636 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 SLC17A6Q9P2U8 582 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 MYOTQ9UBF9 498 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 FEZ2Q9UHY8 353 aaPredicted RBP3.31□□□□□ -1.88
USP46-205ENST00000504078 AMFRQ9UKV5 643 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 BOKQ9UMX3 212 aaPredicted RBP3.31□□□□□ -1.88
USP46-205ENST00000504078 DTX4Q9Y2E6 619 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 YARS2Q9Y2Z4 477 aaKnown RBP3.31□□□□□ -1.88
USP46-205ENST00000504078 CLDN16Q9Y5I7 305 aa3.31□□□□□ -1.88
USP46-205ENST00000504078 MAP1AP78559 2803 aaPredicted RBP3.31□□□□□ -1.88
USP46-205ENST00000504078 STAB1Q9NY15 2570 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 HIVEP2P31629 2446 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.3□□□□□ -1.88
USP46-205ENST00000504078 MBD3L3A6NE82 208 aaPredicted RBP3.3□□□□□ -1.88
USP46-205ENST00000504078 ZNF839A8K0R7 811 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 C17orf51A8MQB3 221 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 C17orf105B2RV13 164 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 FAM47E-STBD1D6RA91 191 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 GFYI3L273 518 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 CASKO14936 926 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 KPNA5O15131 536 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 CTIFO43310 598 aaKnown RBP3.3□□□□□ -1.88
USP46-205ENST00000504078 TPD52L2O43399 206 aaKnown RBP3.3□□□□□ -1.88
USP46-205ENST00000504078 ERI3O43414 337 aaKnown RBP3.3□□□□□ -1.88
USP46-205ENST00000504078 SPRY1O43609 319 aaPredicted RBP3.3□□□□□ -1.88
USP46-205ENST00000504078 SUSD5O60279 629 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 HCN1O60741 890 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 AVILO75366 819 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 ETHE1O95571 254 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 ACSL3O95573 720 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 GUCA1CO95843 209 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 FTCDO95954 541 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 RPS3P23396 243 aaKnown RBP eCLIP3.3□□□□□ -1.88
USP46-205ENST00000504078 LOXP28300 417 aaPredicted RBP3.3□□□□□ -1.88
USP46-205ENST00000504078 ATP5DP30049 168 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 HNRNPH1P31943 449 aaKnown RBP3.3□□□□□ -1.88
USP46-205ENST00000504078 CTNNA1P35221 906 aaKnown RBP3.3□□□□□ -1.88
USP46-205ENST00000504078 RPL22P35268 128 aaKnown RBP3.3□□□□□ -1.88
USP46-205ENST00000504078 GRK3P35626 688 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 PEX19P40855 299 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 SLC1A2P43004 574 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 MASP1P48740 699 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 VPS41P49754 854 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 PLA2G16P53816 162 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 FBXW4P57775 412 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 BASP1P80723 227 aaKnown RBP3.3□□□□□ -1.88
USP46-205ENST00000504078 REEP5Q00765 189 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 OCRLQ01968 901 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 CTBP1Q13363 440 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 RUNX2Q13950 521 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 ARHGAP19Q14CB8 494 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 IQCB1Q15051 598 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 RBBP5Q15291 538 aaKnown RBP3.3□□□□□ -1.88
USP46-205ENST00000504078 EXOC3L2Q2M3D2 409 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 PARP6Q2NL67 630 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 TSNAXIP1Q2TAA8 658 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 C18orf21Q32NC0 220 aaPredicted RBP3.3□□□□□ -1.88
USP46-205ENST00000504078 KBTBD12Q3ZCT8 623 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 FBXO48Q5FWF7 155 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 C6orf52Q5T4I8 152 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 NSUN5P2Q63ZY6 315 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 HEPHL1Q6MZM0 1159 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 C11orf63Q6NUN7 778 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 PPP4R4Q6NUP7 873 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 CAVIN1Q6NZI2 390 aaKnown RBP3.3□□□□□ -1.88
USP46-205ENST00000504078 ZNF549Q6P9A3 640 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 AGTRAPQ6RW13 159 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 ZNF704Q6ZNC4 412 aaPredicted RBP3.3□□□□□ -1.88
USP46-205ENST00000504078 DGAT2L6Q6ZPD8 337 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 CLEC17AQ6ZS10 378 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 RGS9BPQ6ZS82 235 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 CENPUQ71F23 418 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 MAATS1Q7Z4T9 603 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 KIAA1328Q86T90 577 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 GRAMD2AQ8IUY3 354 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 OR4N5Q8IXE1 308 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 RCOR2Q8IZ40 523 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 ZNF619Q8N2I2 560 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 RASGEF1CQ8N431 466 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 ANKS4BQ8N8V4 417 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 MBD3L2Q8NHZ7 208 aaPredicted RBP3.3□□□□□ -1.88
USP46-205ENST00000504078 SLC22A8Q8TCC7 542 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 CD200R1Q8TD46 325 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 TMEM171Q8WVE6 324 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 SMPDL3BQ92485 455 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 PIGTQ969N2 578 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 NEIL2Q969S2 332 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 DACT3Q96B18 629 aaPredicted RBP3.3□□□□□ -1.88
USP46-205ENST00000504078 ZNF669Q96BR6 464 aaPredicted RBP3.3□□□□□ -1.88
USP46-205ENST00000504078 TM4SF19Q96DZ7 209 aa3.3□□□□□ -1.88
USP46-205ENST00000504078 SPACA9Q96E40 222 aaPredicted RBP3.3□□□□□ -1.88
USP46-205ENST00000504078 ZBED6CLQ96FA7 236 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms