RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 RBM18Q96H35 190 aaKnown RBP14.41□□□□□ -0.1
PDLIM7-210ENST00000503827 FBXL20Q96IG2 436 aa14.41□□□□□ -0.1
PDLIM7-210ENST00000503827 FAM111AQ96PZ2 611 aa14.41□□□□□ -0.1
PDLIM7-210ENST00000503827 HS3ST6Q96QI5 342 aa14.41□□□□□ -0.1
PDLIM7-210ENST00000503827 FETUBQ9UGM5 382 aa14.41□□□□□ -0.1
PDLIM7-210ENST00000503827 EXPH5Q8NEV8 1989 aa14.41□□□□□ -0.1
PDLIM7-210ENST00000503827 ANK3Q12955 4377 aaKnown RBP14.41□□□□□ -0.1
PDLIM7-210ENST00000503827 USF3Q68DE3 2245 aa14.41□□□□□ -0.1
PDLIM7-210ENST00000503827 MED12Q93074 2177 aa14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 IQANK1A0A1B0GTG1 560 aa14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 H0Y3Z8 333 aa14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 CD5LO43866 347 aa14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 SMNDC1O75940 238 aaKnown RBP eCLIP14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 CD79BP40259 229 aa14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 CDKN2DP55273 166 aa14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 PDAP1Q13442 181 aaKnown RBP14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 VEZF1Q14119 521 aa14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 SLBPQ14493 270 aaKnown RBP eCLIP14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 RPS6KA2Q15349 733 aa14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 CLEC12BQ2HXU8 276 aa14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 HSP90AA5PQ58FG0 334 aa14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 FNDC7Q5VTL7 733 aa14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 DRICH1Q6PGQ1 229 aaPredicted RBP14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 CAND1Q86VP6 1230 aaKnown RBP14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 TAGAPQ8N103 731 aa14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 UCN2Q96RP3 112 aa14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 ANGPTL4Q9BY76 406 aa14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 ROGDIQ9GZN7 287 aa14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 WWTR1Q9GZV5 400 aa14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 NT5DC2Q9H857 520 aa14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 PRDM7Q9NQW5 492 aa14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 IARS2Q9NSE4 1012 aaKnown RBP14.4□□□□□ -0.1
PDLIM7-210ENST00000503827 HRKO00198 91 aa14.39□□□□□ -0.11
PDLIM7-210ENST00000503827 MLNP12872 115 aa14.39□□□□□ -0.11
PDLIM7-210ENST00000503827 CHMP24386 653 aa14.39□□□□□ -0.11
PDLIM7-210ENST00000503827 RPP38P78345 283 aaKnown RBP14.39□□□□□ -0.11
PDLIM7-210ENST00000503827 SRYQ05066 204 aa14.39□□□□□ -0.11
PDLIM7-210ENST00000503827 BIKQ13323 160 aa14.39□□□□□ -0.11
PDLIM7-210ENST00000503827 RBM20Q5T481 1227 aaKnown RBP14.39□□□□□ -0.11
PDLIM7-210ENST00000503827 BICRALQ6AI39 1079 aa14.39□□□□□ -0.11
PDLIM7-210ENST00000503827 ENPP6Q6UWR7 440 aa14.39□□□□□ -0.11
PDLIM7-210ENST00000503827 RNF111Q6ZNA4 994 aa14.39□□□□□ -0.11
PDLIM7-210ENST00000503827 SLCO4C1Q6ZQN7 724 aa14.39□□□□□ -0.11
PDLIM7-210ENST00000503827 ADGRE4PQ86SQ3 457 aa14.39□□□□□ -0.11
PDLIM7-210ENST00000503827 YRDCQ86U90 279 aaKnown RBP14.39□□□□□ -0.11
PDLIM7-210ENST00000503827 OR4N5Q8IXE1 308 aa14.39□□□□□ -0.11
PDLIM7-210ENST00000503827 FAM83FQ8NEG4 500 aaPredicted RBP14.39□□□□□ -0.11
PDLIM7-210ENST00000503827 SPPL2AQ8TCT8 520 aa14.39□□□□□ -0.11
PDLIM7-210ENST00000503827 PPWD1Q96BP3 646 aaKnown RBP14.39□□□□□ -0.11
PDLIM7-210ENST00000503827 MAPKAP1Q9BPZ7 522 aa14.39□□□□□ -0.11
PDLIM7-210ENST00000503827 PIGQQ9BRB3 760 aa14.39□□□□□ -0.11
PDLIM7-210ENST00000503827 REG4Q9BYZ8 158 aa14.39□□□□□ -0.11
PDLIM7-210ENST00000503827 TEX10Q9NXF1 929 aaPredicted RBP14.39□□□□□ -0.11
PDLIM7-210ENST00000503827 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 FGF17O60258 216 aa14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 TNFSF13O75888 250 aa14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 TBX6O95947 436 aaPredicted RBP14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 CPN2P22792 545 aa14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 KCNC1P48547 511 aa14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 TMED10P49755 219 aaKnown RBP14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 FBXW4P57775 412 aa14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 HERVK_113P63132 956 aa14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 ERVK-8P63133 956 aa14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 IGLV3-21P80748 117 aaPredicted RBP14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 PLIN5Q00G26 463 aa14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 GPS1Q13098 491 aa14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 EBPQ15125 230 aaKnown RBP14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 SBSNQ6UWP8 590 aa14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 PLXDC2Q6UX71 529 aa14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 C2CD4AQ8NCU7 369 aaPredicted RBP14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 SRFBP1Q8NEF9 429 aaKnown RBP14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 ZC3HAV1LQ96H79 300 aaKnown RBP14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 TMEM41AQ96HV5 264 aa14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 MARK4Q96L34 752 aa14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 KCNC2Q96PR1 638 aa14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 F2RL3Q96RI0 385 aa14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 EGFL8Q99944 293 aa14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 ERVK-6Q9BXR3 956 aa14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 PITHD1Q9GZP4 211 aaPredicted RBP14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 ERVK-19Q9WJR5 959 aa14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 WIF1Q9Y5W5 379 aa14.38□□□□□ -0.11
PDLIM7-210ENST00000503827 A0A1W2PNV4 684 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 OR6C76A6NM76 312 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 CDC7O00311 574 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 GNB5O14775 395 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 WDR47O94967 919 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 FAM157CP0CG43 387 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 POU2F1P14859 743 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 LOXP28300 417 aaPredicted RBP14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 PTPN6P29350 595 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 UGT2B10P36537 528 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 CASP3P42574 277 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 MAGEA6P43360 314 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 KCNJ1P48048 391 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 PCDH1Q08174 1060 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 KIF5AQ12840 1032 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 ETFDHQ16134 617 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 TIGD3Q6B0B8 471 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 TMEM64Q6YI46 380 aa14.37□□□□□ -0.11
PDLIM7-210ENST00000503827 DGAT2L6Q6ZPD8 337 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms