RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 CHST4Q8NCG5 386 aa16.46■□□□□ 0.22
HMGXB3-201ENST00000502717 PROKR2Q8NFJ6 384 aa16.46■□□□□ 0.22
HMGXB3-201ENST00000502717 OR56A1Q8NGH5 318 aa16.46■□□□□ 0.22
HMGXB3-201ENST00000502717 CENPOQ9BU64 300 aa16.46■□□□□ 0.22
HMGXB3-201ENST00000502717 KLHL21Q9UJP4 597 aa16.46■□□□□ 0.22
HMGXB3-201ENST00000502717 RREB1Q92766 1687 aa16.46■□□□□ 0.22
HMGXB3-201ENST00000502717 LRRTM2O43300 516 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 SLC25A12O75746 678 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 SLX4IPQ5VYV7 408 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 CREB3L2Q70SY1 520 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 SPERTQ8NA61 448 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 OR2T33Q8NG76 320 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 TM9SF2Q99805 663 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 RIOK2Q9BVS4 552 aaKnown RBP16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 OR51J1Q9H342 316 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 GPSM3Q9Y4H4 160 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 SPO11Q9Y5K1 396 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 DISC1C4P0D8 188 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 EIF3FO00303 357 aaPredicted RBP16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 ACBD7Q8N6N7 88 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 ZNF248Q8NDW4 579 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 KCNN1Q92952 543 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 COQ8BQ96D53 544 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 TSNAXQ99598 290 aaKnown RBP16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 AMBRA1Q9C0C7 1298 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 PHPT1Q9NRX4 125 aaPredicted RBP16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 MYH9P35579 1960 aaKnown RBP16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 ZNF30P17039 623 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 EVI2BP34910 448 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 LIPAP38571 399 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 PITPNBP48739 271 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 LRIT3Q3SXY7 679 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 LRRC73Q5JTD7 316 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 UBXN11Q5T124 520 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 FRMPD2BQ6IN97 320 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 METAP1DQ6UB28 335 aaPredicted RBP16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 GPR135Q8IZ08 494 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 HDDC3Q8N4P3 179 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 HERVK_113Q902F9 699 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 UTS2RQ9UKP6 389 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 ZNF821O75541 412 aaPredicted RBP16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 NT5EP21589 574 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 MLLT10P55197 1068 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 SDR16C5Q8N3Y7 309 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 ARMC5Q96C12 935 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 CACNG2Q9Y698 323 aa16.45■□□□□ 0.22
HMGXB3-201ENST00000502717 C5orf51A6NDU8 294 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 A6NL46 340 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 E2F3O00716 465 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 ARHGAP33O14559 1287 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 PRNPP04156 253 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 DNASE1L1P49184 302 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 FNTBP49356 437 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 COL28A1Q2UY09 1125 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 ZNF783Q6ZMS7 281 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 SYT14Q8NB59 555 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 WRAP53Q9BUR4 548 aaKnown RBP16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 SAV1Q9H4B6 383 aaPredicted RBP16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 XKRYO14609 159 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 BMP8BP34820 402 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 POU4F3Q15319 338 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 FAM122CQ6P4D5 195 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 BMP8AQ7Z5Y6 402 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 TMCO2Q7Z6W1 182 aaPredicted RBP16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 ZNF676Q8N7Q3 588 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 COX18Q8N8Q8 333 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 DOK1Q99704 481 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 OR2AG1Q9H205 316 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 MKL2Q9ULH7 1088 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 LDOC1O95751 146 aaPredicted RBP16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 PLATP00750 562 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 SLC10A3P09131 477 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 CDKN1CP49918 316 aaPredicted RBP16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 MLLT1Q03111 559 aaPredicted RBP16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 PON3Q15166 354 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 BRAT1Q6PJG6 821 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 GDPD4Q6W3E5 623 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 Q6ZSR9 355 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 SLC7A6Q92536 515 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 QPCTLQ9NXS2 382 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 GPN3Q9UHW5 284 aaPredicted RBP16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 GLI3P10071 1580 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 MROH6A6NGR9 719 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 TMX2-CTNND1H3BSU7 103 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 CYP17A1P05093 508 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 JUNDP17535 347 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 ITGA3P26006 1051 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 DTX3Q8N9I9 347 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 C7orf57Q8NEG2 295 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 OR2T11Q8NH01 316 aa16.44■□□□□ 0.22
HMGXB3-201ENST00000502717 GPR32O75388 356 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 MAPK3P27361 379 aaPredicted RBP16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 CMPK1P30085 196 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 CTU2Q2VPK5 515 aaKnown RBP16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 IQCF2Q8IXL9 164 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 DUSP21Q9H596 190 aa16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 RBFOX1Q9NWB1 397 aaKnown RBP16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 LYARQ9NX58 379 aaKnown RBP16.43■□□□□ 0.22
HMGXB3-201ENST00000502717 ZNF639Q9UID6 485 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms