RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 TRIM64A6NGJ6 449 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 ANKDD1BA6NHY2 528 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 TRIM64BA6NI03 449 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 PRKRAO75569 313 aaKnown RBP11.55□□□□□ -0.56
LMNA-218ENST00000502357 GDF1P27539 372 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 PTPN6P29350 595 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 SERPINB3P29508 390 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 PCDH1Q08174 1060 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 TGFBIQ15582 683 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 SPRED3Q2MJR0 410 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 C18orf63Q68DL7 685 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 PLXDC2Q6UX71 529 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 TMEM64Q6YI46 380 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 CAPN12Q6ZSI9 719 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 PM20D2Q8IYS1 436 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 LIX1Q8N485 282 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 NKAPQ8N5F7 415 aaKnown RBP11.55□□□□□ -0.56
LMNA-218ENST00000502357 SPPL2AQ8TCT8 520 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 ZPLD1Q8TCW7 415 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 SLC44A1Q8WWI5 657 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 UCN3Q969E3 161 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 PTCD3Q96EY7 689 aaKnown RBP11.55□□□□□ -0.56
LMNA-218ENST00000502357 Q96MF0 132 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 JSRP1Q96MG2 331 aaPredicted RBP11.55□□□□□ -0.56
LMNA-218ENST00000502357 GNRHR2Q96P88 292 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 TRIB1Q96RU8 372 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 DOHHQ9BU89 302 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 SORBS1Q9BX66 1292 aaKnown RBP11.55□□□□□ -0.56
LMNA-218ENST00000502357 ZNF717Q9BY31 904 aaPredicted RBP11.55□□□□□ -0.56
LMNA-218ENST00000502357 RYDENQ9NUL5 291 aaKnown RBP11.55□□□□□ -0.56
LMNA-218ENST00000502357 COPS7AQ9UBW8 275 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 C15orf41Q9Y2V0 281 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 TESMINQ9Y4I5 508 aa11.55□□□□□ -0.56
LMNA-218ENST00000502357 SONP18583 2426 aaKnown RBP11.55□□□□□ -0.56
LMNA-218ENST00000502357 CHD3Q12873 2000 aaKnown RBP11.54□□□□□ -0.56
LMNA-218ENST00000502357 MXRA5Q9NR99 2828 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 TP73O15350 636 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 RCBTB2O95199 551 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 CPN1P15169 458 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 PTGDSP41222 190 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 CASP3P42574 277 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 RPL21P46778 160 aaKnown RBP11.54□□□□□ -0.56
LMNA-218ENST00000502357 HNRNPH2P55795 449 aaKnown RBP11.54□□□□□ -0.56
LMNA-218ENST00000502357 FBXW4P57775 412 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 HERVK_113P63132 956 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 ERVK-8P63133 956 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 RCN2Q14257 317 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 FRG1Q14331 258 aaKnown RBP11.54□□□□□ -0.56
LMNA-218ENST00000502357 TBCCQ15814 346 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 WIPI1Q5MNZ9 446 aaPredicted RBP11.54□□□□□ -0.56
LMNA-218ENST00000502357 MRM1Q6IN84 353 aaKnown RBP11.54□□□□□ -0.56
LMNA-218ENST00000502357 LAS2Q8IYD9 372 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 SIMC1Q8NDZ2 872 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 FAM13CQ8NE31 585 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 ISL2Q96A47 359 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 ADIPOR1Q96A54 375 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 CTHRC1Q96CG8 243 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 ZNF597Q96LX8 424 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 RILPQ96NA2 401 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 DGAT2Q96PD7 388 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 EGFL8Q99944 293 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 TUBA1CQ9BQE3 449 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 YIPF4Q9BSR8 244 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 REPIN1Q9BWE0 567 aaKnown RBP11.54□□□□□ -0.56
LMNA-218ENST00000502357 RBM24Q9BX46 236 aaKnown RBP11.54□□□□□ -0.56
LMNA-218ENST00000502357 ERVK-6Q9BXR3 956 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 ROGDIQ9GZN7 287 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 COPS7BQ9H9Q2 264 aaPredicted RBP11.54□□□□□ -0.56
LMNA-218ENST00000502357 DNAJC11Q9NVH1 559 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 PTBP2Q9UKA9 531 aaKnown RBP11.54□□□□□ -0.56
LMNA-218ENST00000502357 ERVK-19Q9WJR5 959 aa11.54□□□□□ -0.56
LMNA-218ENST00000502357 ROS1P08922 2347 aa11.53□□□□□ -0.56
LMNA-218ENST00000502357 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.53□□□□□ -0.56
LMNA-218ENST00000502357 PABPN1LA6NDY0 278 aaKnown RBP11.53□□□□□ -0.56
LMNA-218ENST00000502357 A8MXE2 369 aa11.53□□□□□ -0.56
LMNA-218ENST00000502357 EEF1E1-BLOC1S5C9J1V9 151 aa11.53□□□□□ -0.56
LMNA-218ENST00000502357 DNALI1O14645 258 aaPredicted RBP11.53□□□□□ -0.56
LMNA-218ENST00000502357 ARHGEF9O43307 516 aa11.53□□□□□ -0.56
LMNA-218ENST00000502357 CTIFO43310 598 aaKnown RBP11.53□□□□□ -0.56
LMNA-218ENST00000502357 EEF1E1O43324 174 aaKnown RBP11.53□□□□□ -0.56
LMNA-218ENST00000502357 TNFSF13O75888 250 aa11.53□□□□□ -0.56
LMNA-218ENST00000502357 TMIGD3P0DMS9 266 aaPredicted RBP11.53□□□□□ -0.56
LMNA-218ENST00000502357 ALOX15P16050 662 aaPredicted RBP11.53□□□□□ -0.56
LMNA-218ENST00000502357 CPN2P22792 545 aa11.53□□□□□ -0.56
LMNA-218ENST00000502357 HSPA7P48741 367 aa11.53□□□□□ -0.56
LMNA-218ENST00000502357 TBCELQ5QJ74 424 aa11.53□□□□□ -0.56
LMNA-218ENST00000502357 DEPDC1Q5TB30 811 aa11.53□□□□□ -0.56
LMNA-218ENST00000502357 FBXW10Q5XX13 1052 aa11.53□□□□□ -0.56
LMNA-218ENST00000502357 DESI1Q6ICB0 168 aa11.53□□□□□ -0.56
LMNA-218ENST00000502357 C22orf34Q6ZV56 151 aa11.53□□□□□ -0.56
LMNA-218ENST00000502357 ADAMTSL2Q86TH1 951 aa11.53□□□□□ -0.56
LMNA-218ENST00000502357 ST13P4Q8IZP2 240 aaPredicted RBP11.53□□□□□ -0.56
LMNA-218ENST00000502357 RNF175Q8N4F7 328 aa11.53□□□□□ -0.56
LMNA-218ENST00000502357 ABTB1Q969K4 478 aaPredicted RBP11.53□□□□□ -0.56
LMNA-218ENST00000502357 TP53INP1Q96A56 240 aa11.53□□□□□ -0.56
LMNA-218ENST00000502357 TMEM41AQ96HV5 264 aa11.53□□□□□ -0.56
LMNA-218ENST00000502357 SECISBP2Q96T21 854 aaKnown RBP11.53□□□□□ -0.56
LMNA-218ENST00000502357 NAT9Q9BTE0 207 aa11.53□□□□□ -0.56
LMNA-218ENST00000502357 EFCAB11Q9BUY7 163 aa11.53□□□□□ -0.56
LMNA-218ENST00000502357 CAPS2Q9BXY5 557 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms