RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 APOBEC3FQ8IUX4 373 aaKnown RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 CCDC60Q8IWA6 550 aaPredicted RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 DSELQ8IZU8 1212 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 COMMD1Q8N668 190 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 LRRC57Q8N9N7 239 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 FAM47BQ8NA70 645 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 THAP8Q8NA92 274 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 SLC38A9Q8NBW4 561 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 TRMT10AQ8TBZ6 339 aaKnown RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 SSMEM1Q8WWF3 244 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 ESR2Q92731 530 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 DCPSQ96C86 337 aaKnown RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 REPS1Q96D71 796 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 MRPL53Q96EL3 112 aaKnown RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 THOC1Q96FV9 657 aaKnown RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 ZNF419Q96HQ0 510 aaPredicted RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 IGSF21Q96ID5 467 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 CBWD1Q9BRT8 395 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 LMF2Q9BU23 707 aaKnown RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 TRIM62Q9BVG3 475 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 PINK1Q9BXM7 581 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 ROPN1BQ9BZX4 212 aaPredicted RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 NPFFR1Q9GZQ6 430 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 NACA2Q9H009 215 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 FAM234AQ9H0X4 552 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 R3HDMLQ9H3Y0 253 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 ZDHHC6Q9H6R6 413 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 TDRD3Q9H7E2 651 aaKnown RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 C8orf33Q9H7E9 229 aaPredicted RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 ANKRA2Q9H9E1 313 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 RAB18Q9NP72 206 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 TREM1Q9NP99 234 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 QPCTLQ9NXS2 382 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 KLHL28Q9NXS3 571 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 GAR1Q9NY12 217 aaKnown RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 SEC14L3Q9UDX4 400 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 PISDQ9UG56 409 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 LCMT1Q9UIC8 334 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 TTC7AQ9ULT0 858 aaPredicted RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 WDR83OSQ9Y284 106 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 TMED7Q9Y3B3 224 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 OR10H1Q9Y4A9 318 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 SLCO1B1Q9Y6L6 691 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 DDX60LQ5H9U9 1706 aaKnown RBP4□□□□□ -1.77
HMGB1P21-201ENST00000502313 DOCK2Q92608 1830 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 OTOFQ9HC10 1997 aa4□□□□□ -1.77
HMGB1P21-201ENST00000502313 A0A087WUV0 522 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 TMEM191CA6NGB0 347 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 CASTOR2A6NHX0 329 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 TMEM150CB9EJG8 249 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 WASH3PC4AMC7 463 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 NPIPA2E9PIF3 369 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 GOLGA8TH3BQL2 631 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 H7C1Q1 480 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 OR1F1O43749 312 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 RPS6KA5O75582 802 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 SERPINI2O75830 405 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 JTBO76095 146 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 PIGNO95427 931 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 F7P08709 466 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 TMEM191BP0C7N4 346 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 F3P13726 295 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 SRMP19623 302 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 CYP3A5P20815 502 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 UGT1A1P22309 533 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 FDFT1P37268 417 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 HTR2BP41595 481 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 MAGEA11P43364 429 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 ACADVLP49748 655 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 TNFSF10P50591 281 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 PPT1P50897 306 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 CLDN15P56746 228 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 CSNK2BP67870 215 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 DGCR2P98153 550 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 MBTD1Q05BQ5 628 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 SULT2A1Q06520 285 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 FGL1Q08830 312 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 RASGEF1BQ0VAM2 473 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 CCDC173Q0VFZ6 552 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 PJVKQ0ZLH3 352 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 PMPCAQ10713 525 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 ILF2Q12905 390 aaKnown RBP3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 KEAP1Q14145 624 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 HERC3Q15034 1050 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 RBBP7Q16576 425 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 NKAIN1Q4KMZ8 207 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 ENTPD8Q5MY95 495 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 HECTD2Q5U5R9 776 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 NKAIN2Q5VXU1 208 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 SUMO4Q6EEV6 95 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 UGT3A1Q6NUS8 523 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 Q6YL49 198 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 TTLL10Q6ZVT0 673 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 IL17RELQ6ZVW7 336 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 CYB5R4Q7L1T6 521 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 TRPM8Q7Z2W7 1104 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 MB21D2Q8IYB1 491 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 ADGRF4Q8IZF3 695 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 SYCE1Q8N0S2 351 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 LRRC75A-AS1Q8N1F1 130 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms