RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 HSD3B1P14060 373 aa17.03■□□□□ 0.32
HOXD11-202ENST00000498438 CHN1P15882 459 aa17.03■□□□□ 0.32
HOXD11-202ENST00000498438 HSD3B2P26439 372 aa17.03■□□□□ 0.32
HOXD11-202ENST00000498438 GALNSP34059 522 aa17.03■□□□□ 0.32
HOXD11-202ENST00000498438 CRHR1P34998 444 aa17.03■□□□□ 0.32
HOXD11-202ENST00000498438 PKNOX1P55347 436 aa17.03■□□□□ 0.32
HOXD11-202ENST00000498438 CSTF3Q12996 717 aaKnown RBP17.03■□□□□ 0.32
HOXD11-202ENST00000498438 MPEG1Q2M385 716 aa17.03■□□□□ 0.32
HOXD11-202ENST00000498438 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.03■□□□□ 0.32
HOXD11-202ENST00000498438 CCDC153Q494R4 210 aa17.03■□□□□ 0.32
HOXD11-202ENST00000498438 RNF111Q6ZNA4 994 aa17.03■□□□□ 0.32
HOXD11-202ENST00000498438 MAMDC2Q7Z304 686 aaPredicted RBP17.03■□□□□ 0.32
HOXD11-202ENST00000498438 MMP21Q8N119 569 aa17.03■□□□□ 0.32
HOXD11-202ENST00000498438 OR2W6PQ8NHA6 318 aa17.03■□□□□ 0.32
HOXD11-202ENST00000498438 AGAP11Q8TF27 550 aa17.03■□□□□ 0.32
HOXD11-202ENST00000498438 GAL3ST4Q96RP7 486 aa17.03■□□□□ 0.32
HOXD11-202ENST00000498438 KCNA7Q96RP8 456 aa17.03■□□□□ 0.32
HOXD11-202ENST00000498438 ACPTQ9BZG2 426 aa17.03■□□□□ 0.32
HOXD11-202ENST00000498438 C12orf65Q9H3J6 166 aaKnown RBP17.03■□□□□ 0.32
HOXD11-202ENST00000498438 DEPPQ9NTK1 212 aa17.03■□□□□ 0.32
HOXD11-202ENST00000498438 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.03■□□□□ 0.32
HOXD11-202ENST00000498438 VPS29Q9UBQ0 182 aa17.03■□□□□ 0.32
HOXD11-202ENST00000498438 GTF3C1Q12789 2109 aa17.03■□□□□ 0.32
HOXD11-202ENST00000498438 A0A0G2JMM0 328 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 A0A1W2PPB8 328 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 A0A1W2PRS3 328 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 KIR3DP1A8MWS1 328 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 COPEO14579 308 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 GUCY1B2O75343 617 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 ULK1O75385 1050 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 ESRRBO95718 433 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 CLPSP04118 112 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 KRT4P19013 534 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 CA7P43166 264 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 CCT5P48643 541 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 SLC37A1P57057 533 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 HSF1Q00613 529 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 ZNF750Q32MQ0 723 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 PIGGQ5H8A4 983 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 OPN5Q6U736 354 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 RTL4Q6ZR62 310 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 SLC29A4Q7RTT9 530 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 GALNT12Q8IXK2 581 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 C4orf33Q8N1A6 199 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 GHDCQ8N2G8 530 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 ZFP62Q8NB50 900 aaPredicted RBP17.02■□□□□ 0.32
HOXD11-202ENST00000498438 OR4K14Q8NGD5 310 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 CXorf21Q9HAI6 301 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 MID1IP1Q9NPA3 183 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 GRID1Q9ULK0 1009 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 TIMM22Q9Y584 194 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 PCDHA9Q9Y5H5 950 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 UNC79Q9P2D8 2635 aa17.02■□□□□ 0.32
HOXD11-202ENST00000498438 PCNX1Q96RV3 2341 aa17.02■□□□□ 0.31
HOXD11-202ENST00000498438 C1orf226A1L170 272 aa17.01■□□□□ 0.31
HOXD11-202ENST00000498438 UBFD1O14562 309 aaKnown RBP17.01■□□□□ 0.31
HOXD11-202ENST00000498438 HS6ST1O60243 411 aa17.01■□□□□ 0.31
HOXD11-202ENST00000498438 NADKO95544 446 aaPredicted RBP17.01■□□□□ 0.31
HOXD11-202ENST00000498438 CPMP14384 443 aa17.01■□□□□ 0.31
HOXD11-202ENST00000498438 SSTR4P31391 388 aa17.01■□□□□ 0.31
HOXD11-202ENST00000498438 PTGER1P34995 402 aa17.01■□□□□ 0.31
HOXD11-202ENST00000498438 XKP51811 444 aa17.01■□□□□ 0.31
HOXD11-202ENST00000498438 EBPQ15125 230 aaKnown RBP17.01■□□□□ 0.31
HOXD11-202ENST00000498438 C3AR1Q16581 482 aa17.01■□□□□ 0.31
HOXD11-202ENST00000498438 SLC48A1Q6P1K1 146 aa17.01■□□□□ 0.31
HOXD11-202ENST00000498438 FRMD7Q6ZUT3 714 aa17.01■□□□□ 0.31
HOXD11-202ENST00000498438 GBP7Q8N8V2 638 aaPredicted RBP17.01■□□□□ 0.31
HOXD11-202ENST00000498438 CCDC63Q8NA47 563 aa17.01■□□□□ 0.31
HOXD11-202ENST00000498438 GOLM1Q8NBJ4 401 aa17.01■□□□□ 0.31
HOXD11-202ENST00000498438 RDH11Q8TC12 318 aa17.01■□□□□ 0.31
HOXD11-202ENST00000498438 SLC22A8Q8TCC7 542 aa17.01■□□□□ 0.31
HOXD11-202ENST00000498438 CHTF18Q8WVB6 975 aa17.01■□□□□ 0.31
HOXD11-202ENST00000498438 TM4SF18Q96CE8 201 aa17.01■□□□□ 0.31
HOXD11-202ENST00000498438 WWTR1Q9GZV5 400 aa17.01■□□□□ 0.31
HOXD11-202ENST00000498438 TINAGQ9UJW2 476 aa17.01■□□□□ 0.31
HOXD11-202ENST00000498438 CES1P1Q9UKY3 287 aa17.01■□□□□ 0.31
HOXD11-202ENST00000498438 TLDC2A0PJX2 215 aa17■□□□□ 0.31
HOXD11-202ENST00000498438 CCDC151A5D8V7 595 aa17■□□□□ 0.31
HOXD11-202ENST00000498438 PINLYPA6NC86 204 aa17■□□□□ 0.31
HOXD11-202ENST00000498438 OR6C76A6NM76 312 aa17■□□□□ 0.31
HOXD11-202ENST00000498438 G3V3Y1 287 aa17■□□□□ 0.31
HOXD11-202ENST00000498438 CCL21O00585 134 aa17■□□□□ 0.31
HOXD11-202ENST00000498438 ZNHIT1O43257 154 aa17■□□□□ 0.31
HOXD11-202ENST00000498438 ZNF500O60304 480 aaPredicted RBP17■□□□□ 0.31
HOXD11-202ENST00000498438 NUDT17P0C025 328 aa17■□□□□ 0.31
HOXD11-202ENST00000498438 CT62P0C5K7 136 aa17■□□□□ 0.31
HOXD11-202ENST00000498438 NAGLUP54802 743 aa17■□□□□ 0.31
HOXD11-202ENST00000498438 CASP6P55212 293 aa17■□□□□ 0.31
HOXD11-202ENST00000498438 FOXA1P55317 472 aa17■□□□□ 0.31
HOXD11-202ENST00000498438 DNAJB13P59910 316 aa17■□□□□ 0.31
HOXD11-202ENST00000498438 HMGCS1Q01581 520 aa17■□□□□ 0.31
HOXD11-202ENST00000498438 SLC18A2Q05940 514 aa17■□□□□ 0.31
HOXD11-202ENST00000498438 C6orf163Q5TEZ5 329 aa17■□□□□ 0.31
HOXD11-202ENST00000498438 SPPL2CQ8IUH8 684 aa17■□□□□ 0.31
HOXD11-202ENST00000498438 CHERPQ8IWX8 916 aaKnown RBP17■□□□□ 0.31
HOXD11-202ENST00000498438 OR2M7Q8NG81 312 aa17■□□□□ 0.31
HOXD11-202ENST00000498438 C16orf52Q8NHV5 167 aa17■□□□□ 0.31
HOXD11-202ENST00000498438 AENQ8WTP8 325 aaKnown RBP17■□□□□ 0.31
HOXD11-202ENST00000498438 SGCZQ96LD1 299 aa17■□□□□ 0.31
HOXD11-202ENST00000498438 SUCOQ9UBS9 1254 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms