RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 UBTD2Q8WUN7 234 aa17.11■□□□□ 0.33
PRKCB-209ENST00000498058 NXNL1Q96CM4 212 aa17.11■□□□□ 0.33
PRKCB-209ENST00000498058 ZNF717Q9BY31 904 aaPredicted RBP17.11■□□□□ 0.33
PRKCB-209ENST00000498058 ROGDIQ9GZN7 287 aa17.11■□□□□ 0.33
PRKCB-209ENST00000498058 SACM1LQ9NTJ5 587 aa17.11■□□□□ 0.33
PRKCB-209ENST00000498058 NUDT4Q9NZJ9 180 aa17.11■□□□□ 0.33
PRKCB-209ENST00000498058 ARHGAP21Q5T5U3 1957 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 ATP6AP2A0A1C7CYW4 349 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 SYNDIG1LA6NDD5 238 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 SUPT3HB4E1H0 165 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 PLPP1O14494 284 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 SUPT3HO75486 399 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 ATP6AP2O75787 350 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 RFPL3SP0C7P2 107 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 GLI4P10075 376 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 ACVR2AP27037 513 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 SSR2P43308 183 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 IRF9Q00978 393 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 DDX39BQ13838 428 aaKnown RBP17.1■□□□□ 0.33
PRKCB-209ENST00000498058 MPEG1Q2M385 716 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 AP5B1Q2VPB7 878 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 TMEM35AQ53FP2 167 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 NDUFAF5Q5TEU4 345 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 OR4C11Q6IEV9 310 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 ZNF585AQ6P3V2 769 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 PAOXQ6QHF9 649 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 OPN5Q6U736 354 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 TIFABQ6ZNK6 161 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 RGS9BPQ6ZS82 235 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 GK5Q6ZS86 529 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 FAM47EQ6ZV65 393 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 HUS1BQ8NHY5 278 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 STAG3L4Q8TBR4 150 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 TTYH2Q9BSA4 534 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 CNPPD1Q9BV87 410 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 KCNJ16Q9NPI9 418 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 SPRR3Q9UBC9 169 aa17.1■□□□□ 0.33
PRKCB-209ENST00000498058 A0A087X1B8 175 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 A0A0G2JNJ9 132 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 K7EPI3 171 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 ATP8B1O43520 1251 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 KERAO60938 352 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 CLPSP04118 112 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 S100BP04271 92 aaPredicted RBP17.09■□□□□ 0.33
PRKCB-209ENST00000498058 HOXD4P09016 255 aaPredicted RBP17.09■□□□□ 0.33
PRKCB-209ENST00000498058 ADH7P40394 386 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 DLX5P56178 289 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 FOLH1Q04609 750 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 GRHL2Q6ISB3 625 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 CHSY3Q70JA7 882 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 TBC1D1Q86TI0 1168 aaPredicted RBP17.09■□□□□ 0.33
PRKCB-209ENST00000498058 CENPLQ8N0S6 344 aaPredicted RBP17.09■□□□□ 0.33
PRKCB-209ENST00000498058 OR5L2Q8NGL0 311 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 NUBPLQ8TB37 319 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 ACMSDQ8TDX5 336 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 KCTD4Q8WVF5 259 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 NRGNQ92686 78 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 ISL2Q96A47 359 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 CMTM7Q96FZ5 175 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 PGM2Q96G03 612 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 SGCZQ96LD1 299 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 DGAT2Q96PD7 388 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 CENPHQ9H3R5 247 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 RPF2Q9H7B2 306 aaKnown RBP17.09■□□□□ 0.33
PRKCB-209ENST00000498058 DMRT3Q9NQL9 472 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 SNX15Q9NRS6 342 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 SENP1Q9P0U3 644 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 OPTCQ9UBM4 332 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 Q9UFV3 132 aa17.09■□□□□ 0.33
PRKCB-209ENST00000498058 A0A1W2PS29 197 aa17.08■□□□□ 0.32
PRKCB-209ENST00000498058 HMX2A2RU54 273 aa17.08■□□□□ 0.32
PRKCB-209ENST00000498058 OR14I1A6ND48 311 aa17.08■□□□□ 0.32
PRKCB-209ENST00000498058 AQP7O14520 342 aa17.08■□□□□ 0.32
PRKCB-209ENST00000498058 BCKDKO14874 412 aa17.08■□□□□ 0.32
PRKCB-209ENST00000498058 EEDO75530 441 aaKnown RBP17.08■□□□□ 0.32
PRKCB-209ENST00000498058 P04436 131 aa17.08■□□□□ 0.32
PRKCB-209ENST00000498058 LTA4HP09960 611 aaKnown RBP17.08■□□□□ 0.32
PRKCB-209ENST00000498058 PRAMEF20Q5VT98 475 aa17.08■□□□□ 0.32
PRKCB-209ENST00000498058 SPNS3Q6ZMD2 512 aa17.08■□□□□ 0.32
PRKCB-209ENST00000498058 ACAD11Q709F0 780 aa17.08■□□□□ 0.32
PRKCB-209ENST00000498058 TEX9Q8N6V9 391 aa17.08■□□□□ 0.32
PRKCB-209ENST00000498058 PAQR8Q8TEZ7 354 aa17.08■□□□□ 0.32
PRKCB-209ENST00000498058 UBE2E3Q969T4 207 aa17.08■□□□□ 0.32
PRKCB-209ENST00000498058 MTERF1Q99551 399 aaKnown RBP17.08■□□□□ 0.32
PRKCB-209ENST00000498058 NMRAL1Q9HBL8 299 aa17.08■□□□□ 0.32
PRKCB-209ENST00000498058 COPS7AQ9UBW8 275 aa17.08■□□□□ 0.32
PRKCB-209ENST00000498058 ACOT9Q9Y305 439 aa17.08■□□□□ 0.32
PRKCB-209ENST00000498058 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.08■□□□□ 0.32
PRKCB-209ENST00000498058 LRRC3CA6NJW4 275 aa17.07■□□□□ 0.32
PRKCB-209ENST00000498058 TMPRSS11DO60235 418 aa17.07■□□□□ 0.32
PRKCB-209ENST00000498058 KLK8O60259 260 aa17.07■□□□□ 0.32
PRKCB-209ENST00000498058 LRATO95237 230 aa17.07■□□□□ 0.32
PRKCB-209ENST00000498058 ALDOAP04075 364 aaKnown RBP17.07■□□□□ 0.32
PRKCB-209ENST00000498058 RIPPLY3P57055 190 aa17.07■□□□□ 0.32
PRKCB-209ENST00000498058 RPS13P62277 151 aaKnown RBP17.07■□□□□ 0.32
PRKCB-209ENST00000498058 HERVK_113P63132 956 aa17.07■□□□□ 0.32
PRKCB-209ENST00000498058 ERVK-8P63133 956 aa17.07■□□□□ 0.32
PRKCB-209ENST00000498058 TNFRSF17Q02223 184 aa17.07■□□□□ 0.32
PRKCB-209ENST00000498058 SLC10A1Q14973 349 aa17.07■□□□□ 0.32
PRKCB-209ENST00000498058 SLC22A10Q63ZE4 541 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms