RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 K7EQD1 137 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 TIMM44O43615 452 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 PRAF2O60831 178 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 SAP30O75446 220 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 PGLSO95336 258 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 SNAI1O95863 264 aaPredicted RBP2.36□□□□□ -2.03
RIF1-212ENST00000498041 C9P02748 559 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 RPN1P04843 607 aaKnown RBP2.36□□□□□ -2.03
RIF1-212ENST00000498041 QDPRP09417 244 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 ACADSP16219 412 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 PDGFRAP16234 1089 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 DUTP33316 252 aaKnown RBP2.36□□□□□ -2.03
RIF1-212ENST00000498041 CCT6AP40227 531 aaKnown RBP2.36□□□□□ -2.03
RIF1-212ENST00000498041 CDX1P47902 265 aaPredicted RBP2.36□□□□□ -2.03
RIF1-212ENST00000498041 NPY4RP50391 375 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 NAGLUP54802 743 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 CLDN17P56750 224 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 BACE1P56817 501 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 RPS6P62753 249 aaKnown RBP2.36□□□□□ -2.03
RIF1-212ENST00000498041 HMGN5P82970 282 aaKnown RBP2.36□□□□□ -2.03
RIF1-212ENST00000498041 CCZ1BP86790 482 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 CCZ1P86791 482 aaPredicted RBP2.36□□□□□ -2.03
RIF1-212ENST00000498041 AKAP17AQ02040 695 aaKnown RBP2.36□□□□□ -2.03
RIF1-212ENST00000498041 PAX8Q06710 450 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 IL10RBQ08334 325 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 ZNF177Q13360 481 aaPredicted RBP2.36□□□□□ -2.03
RIF1-212ENST00000498041 TNK1Q13470 666 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 GIT2Q14161 759 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 TAZQ16635 292 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 DUSP5Q16690 384 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 FAM106AQ4KMX7 169 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 EPC2Q52LR7 807 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 C1orf220Q5T0J3 134 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 SPOUT1Q5T280 376 aaKnown RBP2.36□□□□□ -2.03
RIF1-212ENST00000498041 SNRNP48Q6IEG0 339 aaKnown RBP2.36□□□□□ -2.03
RIF1-212ENST00000498041 FAM166AQ6J272 317 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 SLC39A4Q6P5W5 647 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 C3P1Q6ZMU1 363 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 TMEM179Q6ZVK1 233 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 PRUNE1Q86TP1 453 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 FBXO16Q8IX29 292 aaPredicted RBP2.36□□□□□ -2.03
RIF1-212ENST00000498041 TIGD4Q8IY51 512 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 DAW1Q8N136 415 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 CNNM3Q8NE01 707 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 Q8NFD4 153 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 OR10G7Q8NGN6 311 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 MIPOL1Q8TD10 442 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 GRK7Q8WTQ7 553 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 NELFBQ8WX92 580 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 RASL10AQ92737 203 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 NXPE2Q96DL1 559 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 SIPA1Q96FS4 1042 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 AK8Q96MA6 479 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 FERMT1Q9BQL6 677 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 CRACR2AQ9BSW2 395 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 SPZ1Q9BXG8 430 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 AP1M1Q9BXS5 423 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 TRIM6Q9C030 488 aaPredicted RBP2.36□□□□□ -2.03
RIF1-212ENST00000498041 DNAI2Q9GZS0 605 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 ZSCAN16Q9H4T2 348 aaPredicted RBP2.36□□□□□ -2.03
RIF1-212ENST00000498041 GPN1Q9HCN4 374 aaPredicted RBP2.36□□□□□ -2.03
RIF1-212ENST00000498041 RBM28Q9NW13 759 aaKnown RBP2.36□□□□□ -2.03
RIF1-212ENST00000498041 CCPG1Q9ULG6 757 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 AGTPBP1Q9UPW5 1226 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 CSAG2Q9Y5P2 127 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 UBIAD1Q9Y5Z9 338 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 V9GYY5 206 aaPredicted RBP2.36□□□□□ -2.03
RIF1-212ENST00000498041 PFASO15067 1338 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 LOC285556D6RIA3 1793 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 PLIN4Q96Q06 1357 aa2.36□□□□□ -2.03
RIF1-212ENST00000498041 SIP14410 1827 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 TRAV18A0A075B6X5 111 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 IGHV4-30-2A0A087WSY4 118 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 A0A087WZ39 114 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 IQCMA0A1B0GVH7 501 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 A0A1W2PPR1 153 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 NKX6-3A6NJ46 265 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 A8MVM7 634 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 PDHXO00330 501 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 ZNF263O14978 683 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 EIF5BO60841 1220 aaKnown RBP2.35□□□□□ -2.03
RIF1-212ENST00000498041 YEATS4O95619 227 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 GBAP04062 536 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 IQCF3P0C7M6 154 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 CYP2B6P20813 491 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 GATA2P23769 480 aaPredicted RBP2.35□□□□□ -2.03
RIF1-212ENST00000498041 CAPGP40121 348 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 TNFSF9P41273 254 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 CAPZA1P52907 286 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 SLC12A3P55017 1021 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 MS4A18Q3C1V0 323 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 LBHQ53QV2 105 aaPredicted RBP2.35□□□□□ -2.03
RIF1-212ENST00000498041 TCTEX1D4Q5JR98 221 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 FAM91A1Q658Y4 838 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 SASS6Q6UVJ0 657 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 SUSD1Q6UWL2 747 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 SPATA21Q7Z572 469 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 GPR141Q7Z602 305 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 PIGWQ7Z7B1 504 aa2.35□□□□□ -2.03
RIF1-212ENST00000498041 P2RY8Q86VZ1 359 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms