RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 CHN1P15882 459 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 NME2P22392 152 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 BSGP35613 385 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 KRT6CP48668 564 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 SSR4P51571 173 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 HNRNPH2P55795 449 aaKnown RBP14.26□□□□□ -0.13
NUP50-219ENST00000497960 RBPJQ06330 500 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 FAM219BQ5XKK7 198 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.26□□□□□ -0.13
NUP50-219ENST00000497960 TRIM42Q8IWZ5 723 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 OR4N5Q8IXE1 308 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 METTL6Q8TCB7 284 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 AGR3Q8TD06 166 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 SELENOMQ8WWX9 145 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 RBM18Q96H35 190 aaKnown RBP14.26□□□□□ -0.13
NUP50-219ENST00000497960 KCNA7Q96RP8 456 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 ZNF717Q9BY31 904 aaPredicted RBP14.26□□□□□ -0.13
NUP50-219ENST00000497960 AHSPQ9NZD4 102 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 COPS7AQ9UBW8 275 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 PLEKHB1Q9UF11 243 aaPredicted RBP14.26□□□□□ -0.13
NUP50-219ENST00000497960 MYO7BQ6PIF6 2116 aa14.26□□□□□ -0.13
NUP50-219ENST00000497960 WIPF3A6NGB9 483 aa14.25□□□□□ -0.13
NUP50-219ENST00000497960 PROM1O43490 865 aa14.25□□□□□ -0.13
NUP50-219ENST00000497960 TMPRSS11DO60235 418 aa14.25□□□□□ -0.13
NUP50-219ENST00000497960 LYPLA1O75608 230 aaPredicted RBP14.25□□□□□ -0.13
NUP50-219ENST00000497960 FAM58BPP0C7Q3 252 aa14.25□□□□□ -0.13
NUP50-219ENST00000497960 NR2F6P10588 404 aa14.25□□□□□ -0.13
NUP50-219ENST00000497960 GRK2P25098 689 aa14.25□□□□□ -0.13
NUP50-219ENST00000497960 STT3AP46977 705 aa14.25□□□□□ -0.13
NUP50-219ENST00000497960 IGLV3-21P80748 117 aaPredicted RBP14.25□□□□□ -0.13
NUP50-219ENST00000497960 PLIN5Q00G26 463 aa14.25□□□□□ -0.13
NUP50-219ENST00000497960 FOLH1Q04609 750 aa14.25□□□□□ -0.13
NUP50-219ENST00000497960 SRSF11Q05519 484 aaKnown RBP14.25□□□□□ -0.13
NUP50-219ENST00000497960 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.25□□□□□ -0.13
NUP50-219ENST00000497960 KRTCAP3Q53RY4 240 aa14.25□□□□□ -0.13
NUP50-219ENST00000497960 SGO1Q5FBB7 561 aa14.25□□□□□ -0.13
NUP50-219ENST00000497960 ARL13AQ5H913 290 aaPredicted RBP14.25□□□□□ -0.13
NUP50-219ENST00000497960 TCHHL1Q5QJ38 904 aaPredicted RBP14.25□□□□□ -0.13
NUP50-219ENST00000497960 SH2D4BQ5SQS7 431 aa14.25□□□□□ -0.13
NUP50-219ENST00000497960 C18orf63Q68DL7 685 aa14.25□□□□□ -0.13
NUP50-219ENST00000497960 CYP4Z2PQ8N1L4 340 aa14.25□□□□□ -0.13
NUP50-219ENST00000497960 OR5L2Q8NGL0 311 aa14.25□□□□□ -0.13
NUP50-219ENST00000497960 RAB3IL1Q8TBN0 382 aa14.25□□□□□ -0.13
NUP50-219ENST00000497960 SLC2A12Q8TD20 617 aa14.25□□□□□ -0.13
NUP50-219ENST00000497960 FRMD6Q96NE9 622 aa14.25□□□□□ -0.13
NUP50-219ENST00000497960 PELOQ9BRX2 385 aaKnown RBP14.25□□□□□ -0.13
NUP50-219ENST00000497960 INTS9Q9NV88 658 aaKnown RBP14.25□□□□□ -0.13
NUP50-219ENST00000497960 MYOTQ9UBF9 498 aa14.25□□□□□ -0.13
NUP50-219ENST00000497960 ERVK-11Q9UQG0 969 aa14.25□□□□□ -0.13
NUP50-219ENST00000497960 KLF13Q9Y2Y9 288 aaPredicted RBP14.25□□□□□ -0.13
NUP50-219ENST00000497960 A0A1W2PR48 441 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 ARHGAP10A1A4S6 786 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 A1L4Q6 167 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 A8MVJ9 347 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 NPIPA5E9PKD4 350 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 KLRC4-KLRK1H3BQV0 150 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 MANBAO00462 879 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 PRKNO60260 465 aaPredicted RBP14.24□□□□□ -0.13
NUP50-219ENST00000497960 OR2J2O76002 312 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 CHEK2O96017 543 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 ALOX15P16050 662 aaPredicted RBP14.24□□□□□ -0.13
NUP50-219ENST00000497960 HTR6P50406 440 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 CASP6P55212 293 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 FOXA1P55317 472 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 ABCE1P61221 599 aaKnown RBP14.24□□□□□ -0.13
NUP50-219ENST00000497960 GALNT1Q10472 559 aaPredicted RBP14.24□□□□□ -0.13
NUP50-219ENST00000497960 STX3Q13277 289 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 ATG16L1Q676U5 607 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 CLEC6AQ6EIG7 209 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 MRM1Q6IN84 353 aaKnown RBP14.24□□□□□ -0.13
NUP50-219ENST00000497960 PAGE2Q7Z2X7 111 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 ZNF227Q86WZ6 799 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 GPALPP1Q8IXQ4 340 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 OR8K3Q8NH51 312 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 ASB15Q8WXK1 588 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 ART5Q96L15 291 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 HBEGFQ99075 208 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 TIMMDC1Q9NPL8 285 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 NMRK1Q9NWW6 199 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 HPF1Q9NWY4 346 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 ADAM29Q9UKF5 820 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 NPIPA1Q9UND3 350 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 ASB4Q9Y574 426 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 TIMM22Q9Y584 194 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 NAV2Q8IVL1 2488 aa14.24□□□□□ -0.13
NUP50-219ENST00000497960 TRGV8A0A0C4DH27 118 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 WWP2O00308 870 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 AZIN1O14977 448 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 ITM2AO43736 263 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 OR10H2O60403 315 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 PRKRAO75569 313 aaKnown RBP14.23□□□□□ -0.13
NUP50-219ENST00000497960 GPR75O95800 540 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 PDYNP01213 254 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 GBAP04062 536 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 KLK1P06870 262 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 UROSP10746 265 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 ZNF24P17028 368 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 SLC1A6P48664 564 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 RNF4P78317 190 aa14.23□□□□□ -0.13
NUP50-219ENST00000497960 BST1Q10588 318 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms