RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 RARRES3Q9UL19 164 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 CORO2BQ9UQ03 480 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 POMPQ9Y244 141 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 ZNF780BQ9Y6R6 833 aa13.34□□□□□ -0.27
VPS26A-209ENST00000497564 A0A1B0GX78 115 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 GLOD5A6NK44 160 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 EVPLLA8MZ36 301 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 TMX2-CTNND1H3BSU7 103 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 CLIC1O00299 241 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 NVLO15381 856 aaKnown RBP13.33□□□□□ -0.28
VPS26A-209ENST00000497564 SORBS2O94875 1100 aaKnown RBP13.33□□□□□ -0.28
VPS26A-209ENST00000497564 TNFSF15O95150 251 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 ABCB1P08183 1280 aaPredicted RBP13.33□□□□□ -0.28
VPS26A-209ENST00000497564 HBQ1P09105 142 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 GPX2P18283 190 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 CSNK2A2P19784 350 aaPredicted RBP13.33□□□□□ -0.28
VPS26A-209ENST00000497564 ITIH1P19827 911 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 IL10P22301 178 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 UQCRC2P22695 453 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 PPP2R1BP30154 601 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 ETV5P41161 510 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 GSK3BP49841 420 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 MTPNP58546 118 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 LIPEQ05469 1076 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 ABHD18Q0P651 414 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 TRAP1Q12931 704 aaKnown RBP13.33□□□□□ -0.28
VPS26A-209ENST00000497564 BNIP2Q12982 314 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 GAB1Q13480 694 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 DSG2Q14126 1118 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 TRIM25Q14258 630 aaKnown RBP13.33□□□□□ -0.28
VPS26A-209ENST00000497564 IL11RAQ14626 422 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 C16orf72Q14CZ0 275 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 TMEM64Q6YI46 380 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 TTLL10Q6ZVT0 673 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 RAB11FIP2Q7L804 512 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 CALHM3Q86XJ0 350 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 PTRH1Q86Y79 214 aaKnown RBP13.33□□□□□ -0.28
VPS26A-209ENST00000497564 ZNF595Q8IYB9 648 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 DTWD1Q8N5C7 304 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 BMPERQ8N8U9 685 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 SUN3Q8TAQ9 357 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 ASB9Q96DX5 294 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 MMABQ96EY8 250 aaPredicted RBP13.33□□□□□ -0.28
VPS26A-209ENST00000497564 DPH2Q9BQC3 489 aaPredicted RBP13.33□□□□□ -0.28
VPS26A-209ENST00000497564 SPATA9Q9BWV2 254 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 RAD21L1Q9H4I0 556 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 ALG2Q9H553 416 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 IKZF5Q9H5V7 419 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 DENND2DQ9H6A0 471 aaPredicted RBP13.33□□□□□ -0.28
VPS26A-209ENST00000497564 EPS8L2Q9H6S3 715 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 TPT1P8Q9HAU6 139 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 SIRT3Q9NTG7 399 aaPredicted RBP13.33□□□□□ -0.28
VPS26A-209ENST00000497564 MRPS33Q9Y291 106 aaKnown RBP13.33□□□□□ -0.28
VPS26A-209ENST00000497564 PCDHB3Q9Y5E6 796 aa13.33□□□□□ -0.28
VPS26A-209ENST00000497564 WASHC1A8K0Z3 465 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 CDRT15L2A8MXV6 281 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 PLD2O14939 933 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 ERAL1O75616 437 aaKnown RBP13.32□□□□□ -0.28
VPS26A-209ENST00000497564 GPR75O95800 540 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 ONECUT2O95948 504 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 HTR1EP28566 365 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 MPIP34949 423 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 GZMMP51124 257 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 ACTR3P61158 418 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 IGLV3-21P80748 117 aaPredicted RBP13.32□□□□□ -0.28
VPS26A-209ENST00000497564 MC2RQ01718 297 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 VAC14Q08AM6 782 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 CPZQ66K79 652 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 ZNF551Q7Z340 670 aaPredicted RBP13.32□□□□□ -0.28
VPS26A-209ENST00000497564 LRRC25Q8N386 305 aaPredicted RBP13.32□□□□□ -0.28
VPS26A-209ENST00000497564 RNF148Q8N7C7 305 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 TMEM52Q8NDY8 209 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 OR51Q1Q8NH59 317 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 SFXN5Q8TD22 340 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 WDR60Q8WVS4 1066 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 CCDC124Q96CT7 223 aaKnown RBP13.32□□□□□ -0.28
VPS26A-209ENST00000497564 AURKBQ96GD4 344 aaPredicted RBP13.32□□□□□ -0.28
VPS26A-209ENST00000497564 ZNF578Q96N58 590 aaPredicted RBP13.32□□□□□ -0.28
VPS26A-209ENST00000497564 ZNF583Q96ND8 569 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 OR1F2PQ96R84 312 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 ECSITQ9BQ95 431 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 THUMPD3Q9BV44 507 aaKnown RBP13.32□□□□□ -0.28
VPS26A-209ENST00000497564 TRIM8Q9BZR9 551 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 CXorf36Q9H7Y0 433 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 FBXO8Q9NRD0 319 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 OCIAD1Q9NX40 245 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 HCN3Q9P1Z3 774 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 BCAP29Q9UHQ4 241 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 PACSIN3Q9UKS6 424 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 LHX6Q9UPM6 363 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 LOXL2Q9Y4K0 774 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 MAP4K5Q9Y4K4 846 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 TMEM184BQ9Y519 407 aaPredicted RBP13.32□□□□□ -0.28
VPS26A-209ENST00000497564 PCDHGA8Q9Y5G5 932 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 CACNA1GO43497 2377 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 KALRNO60229 2985 aa13.32□□□□□ -0.28
VPS26A-209ENST00000497564 A8MUI8 341 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 FAM220BPB1ANY3 271 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 B4E171 279 aa13.31□□□□□ -0.28
VPS26A-209ENST00000497564 ACOT8O14734 319 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms