RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 UGT2A1Q9Y4X1 527 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PCDHA13Q9Y5I0 950 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 AUP1Q9Y679 476 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 AQRO60306 1485 aaKnown RBP eCLIP2.95□□□□□ -1.943e-11■■■■□ 24.3
SNRNP48-202ENST00000496946 PLEKHH2Q8IVE3 1493 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 PBRM1Q86U86 1689 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 MAP3K4Q9Y6R4 1608 aa2.95□□□□□ -1.94
SNRNP48-202ENST00000496946 A0A0G2JMP0 313 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 A0A0X1KG70 313 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 PLSCR5A0PG75 271 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 ISPDA4D126 451 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 CENPXA8MT69 81 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 HACD1B0YJ81 288 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 ISM1B1AKI9 464 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 KDM4EB2RXH2 506 aaPredicted RBP2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 C1QTNF3-AMACRE9PGA6 284 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 I3L521 148 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 PRMT5O14744 637 aaPredicted RBP2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 CFLARO15519 480 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 FLRT2O43155 660 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 ITM2AO43736 263 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 NME2P1O60361 137 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 FAM20BO75063 409 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 STX11O75558 287 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 SLCO2B1O94956 709 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 MOCS2O96007 188 aaPredicted RBP2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 PPBPP02775 128 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 MT-ND5P03915 603 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 RAF1P04049 648 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 ANXA2P07355 339 aaKnown RBP2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 ERCC1P07992 297 aaPredicted RBP2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 ABHD2P08910 425 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 TRIM49P0CI25 452 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 TRIM49CP0CI26 452 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 CDH2P19022 906 aaPredicted RBP2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 IMPDH1P20839 514 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 ATP6V1B2P21281 511 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 FPR1P21462 350 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 UGT1A1P22309 533 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 FOXN2P32314 431 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 PBX3P40426 434 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 CSNK1EP49674 416 aaKnown RBP2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 GPR15P49685 360 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 RBP2P50120 134 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 SNAP25P60880 206 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 MRPS11P82912 194 aaKnown RBP2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 SEMG2Q02383 582 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 NHLH2Q02577 135 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 MED21Q13503 144 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 HLXQ14774 488 aaPredicted RBP2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 HYAL4Q2M3T9 481 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 TRIM60Q495X7 471 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 HSD17B12Q53GQ0 312 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 PRAMEF19Q5SWL8 479 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 GPR157Q5UAW9 335 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 EMBQ6PCB8 327 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 MAMDC4Q6UXC1 1216 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 TFAP2EQ6VUC0 442 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 FRMD7Q6ZUT3 714 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 RRM2BQ7LG56 351 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 TAS1R1Q7RTX1 841 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 TIPARPQ7Z3E1 657 aaKnown RBP2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 FAM71AQ8IYT1 594 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 LGI2Q8N0V4 545 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 NANOGP1Q8N7R0 232 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 L3MBTL4Q8NA19 623 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 NHLRC2Q8NBF2 726 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 RBM15BQ8NDT2 890 aaKnown RBP2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 AGBL3Q8NEM8 1001 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 OR1M1Q8NGA1 313 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 OR5M8Q8NGP6 311 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 NFKBIDQ8NI38 313 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC35B2Q8TB61 432 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 ADAMTS14Q8WXS8 1223 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 GCDHQ92947 438 aaPredicted RBP2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 TMEM186Q96B77 213 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 HAVCR1Q96D42 359 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 DAZAP1Q96EP5 407 aaKnown RBP2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 RNFT2Q96EX2 444 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 NECTIN4Q96NY8 510 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 KCNA7Q96RP8 456 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 NPAS1Q99742 590 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 FOXB1Q99853 325 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 CLSTN3Q9BQT9 956 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 TEX101Q9BY14 249 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 YTHDF1Q9BYJ9 559 aaKnown RBP2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 LRRC2Q9BYS8 371 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 CPEB1Q9BZB8 566 aaKnown RBP2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 GLIS2Q9BZE0 524 aaPredicted RBP2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 TRIM31Q9BZY9 425 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 ROGDIQ9GZN7 287 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 ACTL8Q9H568 366 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 LDAHQ9H6V9 325 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 AUNIPQ9H7T9 357 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 LPAR2Q9HBW0 351 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 MKKSQ9NPJ1 570 aaPredicted RBP2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 SLC2A4RGQ9NR83 387 aa2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 ZNF701Q9NV72 531 aaPredicted RBP2.94□□□□□ -1.94
SNRNP48-202ENST00000496946 TMEM248Q9NWD8 314 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms