RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 ZFP28Q8NHY6 868 aa17.16■□□□□ 0.34
TSSC4-210ENST00000496468 THAP4Q8WY91 577 aa17.16■□□□□ 0.34
TSSC4-210ENST00000496468 ZBED6CLQ96FA7 236 aaPredicted RBP17.16■□□□□ 0.34
TSSC4-210ENST00000496468 ZNF681Q96N22 645 aa17.16■□□□□ 0.34
TSSC4-210ENST00000496468 LPAR4Q99677 370 aa17.16■□□□□ 0.34
TSSC4-210ENST00000496468 DUSP26Q9BV47 211 aa17.16■□□□□ 0.34
TSSC4-210ENST00000496468 BHLHE41Q9C0J9 482 aaPredicted RBP17.16■□□□□ 0.34
TSSC4-210ENST00000496468 ZNF700Q9H0M5 742 aa17.16■□□□□ 0.34
TSSC4-210ENST00000496468 P4HTMQ9NXG6 502 aa17.16■□□□□ 0.34
TSSC4-210ENST00000496468 ACACAQ13085 2346 aa17.16■□□□□ 0.34
TSSC4-210ENST00000496468 PCSK5Q92824 1860 aa17.16■□□□□ 0.34
TSSC4-210ENST00000496468 NSG1A0A0A6YYJ2 146 aa17.15■□□□□ 0.34
TSSC4-210ENST00000496468 A8MUA0 341 aa17.15■□□□□ 0.34
TSSC4-210ENST00000496468 C17orf105B2RV13 164 aa17.15■□□□□ 0.34
TSSC4-210ENST00000496468 HPP00738 406 aa17.15■□□□□ 0.34
TSSC4-210ENST00000496468 ATP1B1P05026 303 aa17.15■□□□□ 0.34
TSSC4-210ENST00000496468 LAMP1P11279 417 aa17.15■□□□□ 0.34
TSSC4-210ENST00000496468 TNNI3P19429 210 aa17.15■□□□□ 0.34
TSSC4-210ENST00000496468 NT5EP21589 574 aa17.15■□□□□ 0.34
TSSC4-210ENST00000496468 IL12AP29459 219 aa17.15■□□□□ 0.34
TSSC4-210ENST00000496468 SRSF11Q05519 484 aaKnown RBP17.15■□□□□ 0.34
TSSC4-210ENST00000496468 DUSP2Q05923 314 aa17.15■□□□□ 0.34
TSSC4-210ENST00000496468 MPEG1Q2M385 716 aa17.15■□□□□ 0.34
TSSC4-210ENST00000496468 CPZQ66K79 652 aa17.15■□□□□ 0.34
TSSC4-210ENST00000496468 PIGWQ7Z7B1 504 aa17.15■□□□□ 0.34
TSSC4-210ENST00000496468 GALNT12Q8IXK2 581 aa17.15■□□□□ 0.34
TSSC4-210ENST00000496468 NATD1Q8N6N6 113 aa17.15■□□□□ 0.34
TSSC4-210ENST00000496468 NUDT8Q8WV74 236 aa17.15■□□□□ 0.34
TSSC4-210ENST00000496468 DAZLQ92904 295 aaKnown RBP17.15■□□□□ 0.34
TSSC4-210ENST00000496468 RBM18Q96H35 190 aaKnown RBP17.15■□□□□ 0.34
TSSC4-210ENST00000496468 WDR77Q9BQA1 342 aaPredicted RBP17.15■□□□□ 0.34
TSSC4-210ENST00000496468 TUBB6Q9BUF5 446 aa17.15■□□□□ 0.34
TSSC4-210ENST00000496468 NMUR2Q9GZQ4 415 aa17.15■□□□□ 0.34
TSSC4-210ENST00000496468 SLAMF7Q9NQ25 335 aa17.15■□□□□ 0.34
TSSC4-210ENST00000496468 POLHQ9Y253 713 aa17.15■□□□□ 0.34
TSSC4-210ENST00000496468 MAN2B2Q9Y2E5 1009 aa17.15■□□□□ 0.34
TSSC4-210ENST00000496468 ARL2BPQ9Y2Y0 163 aa17.15■□□□□ 0.34
TSSC4-210ENST00000496468 CLCA3PQ9Y6N3 262 aa17.15■□□□□ 0.34
TSSC4-210ENST00000496468 FAM234BA2RU67 622 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 MYO1GB0I1T2 1018 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 NR5A2O00482 541 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 ITPKBP27987 946 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 S100A3P33764 101 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 GALNSP34059 522 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 MPIP34949 423 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 PGDP52209 483 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 POLR2JP52435 117 aaKnown RBP17.14■□□□□ 0.33
TSSC4-210ENST00000496468 HSPB3Q12988 150 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 UBAP2LQ14157 1087 aaKnown RBP17.14■□□□□ 0.33
TSSC4-210ENST00000496468 RCAN2Q14206 197 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 LTB4RQ15722 352 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 SPRED3Q2MJR0 410 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 TIGD2Q4W5G0 525 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 OR4F3Q6IEY1 312 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 NDUFAF7Q7L592 441 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 CCDC116Q8IYX3 515 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 OR8J2Q8NGG1 315 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 OR9A2Q8NGT5 310 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 SUN3Q8TAQ9 357 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 RIT1Q92963 219 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 PPWD1Q96BP3 646 aaKnown RBP17.14■□□□□ 0.33
TSSC4-210ENST00000496468 COQ8BQ96D53 544 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 AMDHD1Q96NU7 426 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 ZNF160Q9HCG1 818 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 CPNE5Q9HCH3 593 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 ACSS1Q9NUB1 689 aaPredicted RBP17.14■□□□□ 0.33
TSSC4-210ENST00000496468 TMEM45AQ9NWC5 275 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 CCDC167Q9P0B6 97 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 ZFHX4Q86UP3 3567 aa17.14■□□□□ 0.33
TSSC4-210ENST00000496468 NDUFAB1O14561 156 aa17.13■□□□□ 0.33
TSSC4-210ENST00000496468 CCDC22O60826 627 aa17.13■□□□□ 0.33
TSSC4-210ENST00000496468 IL6P05231 212 aa17.13■□□□□ 0.33
TSSC4-210ENST00000496468 PGRP06401 933 aa17.13■□□□□ 0.33
TSSC4-210ENST00000496468 EFNA1P20827 205 aaPredicted RBP17.13■□□□□ 0.33
TSSC4-210ENST00000496468 PTGER1P34995 402 aa17.13■□□□□ 0.33
TSSC4-210ENST00000496468 FRKP42685 505 aaPredicted RBP17.13■□□□□ 0.33
TSSC4-210ENST00000496468 KCNK10P57789 538 aa17.13■□□□□ 0.33
TSSC4-210ENST00000496468 EXT1Q16394 746 aa17.13■□□□□ 0.33
TSSC4-210ENST00000496468 AGKQ53H12 422 aa17.13■□□□□ 0.33
TSSC4-210ENST00000496468 DGAT2L6Q6ZPD8 337 aa17.13■□□□□ 0.33
TSSC4-210ENST00000496468 VWA5B2Q8N398 1253 aa17.13■□□□□ 0.33
TSSC4-210ENST00000496468 CPSF7Q8N684 471 aaKnown RBP17.13■□□□□ 0.33
TSSC4-210ENST00000496468 PTPMT1Q8WUK0 201 aaPredicted RBP17.13■□□□□ 0.33
TSSC4-210ENST00000496468 ART5Q96L15 291 aa17.13■□□□□ 0.33
TSSC4-210ENST00000496468 FER1L6-AS2Q96M78 137 aa17.13■□□□□ 0.33
TSSC4-210ENST00000496468 CNPPD1Q9BV87 410 aa17.13■□□□□ 0.33
TSSC4-210ENST00000496468 GLIPR2Q9H4G4 154 aa17.13■□□□□ 0.33
TSSC4-210ENST00000496468 CXorf21Q9HAI6 301 aa17.13■□□□□ 0.33
TSSC4-210ENST00000496468 NEUROD4Q9HD90 331 aa17.13■□□□□ 0.33
TSSC4-210ENST00000496468 SAR1AQ9NR31 198 aa17.13■□□□□ 0.33
TSSC4-210ENST00000496468 FAM120CQ9NX05 1096 aaKnown RBP17.13■□□□□ 0.33
TSSC4-210ENST00000496468 CAPN7Q9Y6W3 813 aa17.13■□□□□ 0.33
TSSC4-210ENST00000496468 K7ENP7 123 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 RNASET2O00584 256 aaKnown RBP17.12■□□□□ 0.33
TSSC4-210ENST00000496468 FCHO1O14526 889 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 SLITRK5O94991 958 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 GPC1P35052 558 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 ZFP36L2P47974 494 aaKnown RBP17.12■□□□□ 0.33
TSSC4-210ENST00000496468 DGKQP52824 942 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 RRADP55042 308 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms