RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 NMRK1Q9NWW6 199 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 ADAM29Q9UKF5 820 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 ERVK-19Q9WJR5 959 aa11.78□□□□□ -0.52
PTPRF-214ENST00000496043 EXOC1LA0A1B0GW35 172 aa11.77□□□□□ -0.53
PTPRF-214ENST00000496043 ENO4A6NNW6 628 aa11.77□□□□□ -0.53
PTPRF-214ENST00000496043 GUCY1B2O75343 617 aa11.77□□□□□ -0.53
PTPRF-214ENST00000496043 GLSO94925 669 aaPredicted RBP11.77□□□□□ -0.53
PTPRF-214ENST00000496043 AIFM1O95831 613 aa11.77□□□□□ -0.53
PTPRF-214ENST00000496043 OTCP00480 354 aa11.77□□□□□ -0.53
PTPRF-214ENST00000496043 TAC1P20366 129 aa11.77□□□□□ -0.53
PTPRF-214ENST00000496043 XKP51811 444 aa11.77□□□□□ -0.53
PTPRF-214ENST00000496043 TRAF3Q13114 568 aa11.77□□□□□ -0.53
PTPRF-214ENST00000496043 GGTA1PQ4G0N0 100 aa11.77□□□□□ -0.53
PTPRF-214ENST00000496043 GXYLT1Q4G148 440 aa11.77□□□□□ -0.53
PTPRF-214ENST00000496043 OR52E8Q6IFG1 317 aa11.77□□□□□ -0.53
PTPRF-214ENST00000496043 ADGRD1Q6QNK2 874 aa11.77□□□□□ -0.53
PTPRF-214ENST00000496043 NCCRP1Q6ZVX7 275 aaPredicted RBP11.77□□□□□ -0.53
PTPRF-214ENST00000496043 DND1Q8IYX4 353 aaKnown RBP11.77□□□□□ -0.53
PTPRF-214ENST00000496043 TAGAPQ8N103 731 aa11.77□□□□□ -0.53
PTPRF-214ENST00000496043 TMEM251Q8N6I4 163 aa11.77□□□□□ -0.53
PTPRF-214ENST00000496043 OR4F6Q8NGB9 312 aa11.77□□□□□ -0.53
PTPRF-214ENST00000496043 TRPC4APQ8TEL6 797 aa11.77□□□□□ -0.53
PTPRF-214ENST00000496043 CA5BP1Q8WTZ4 195 aa11.77□□□□□ -0.53
PTPRF-214ENST00000496043 SDCCAG3Q96C92 435 aa11.77□□□□□ -0.53
PTPRF-214ENST00000496043 MTBPQ96DY7 904 aa11.77□□□□□ -0.53
PTPRF-214ENST00000496043 TP63Q9H3D4 680 aaPredicted RBP11.77□□□□□ -0.53
PTPRF-214ENST00000496043 CNIH4Q9P003 139 aa11.77□□□□□ -0.53
PTPRF-214ENST00000496043 NFU1Q9UMS0 254 aa11.77□□□□□ -0.53
PTPRF-214ENST00000496043 SNX6Q9UNH7 406 aa11.77□□□□□ -0.53
PTPRF-214ENST00000496043 HRH3Q9Y5N1 445 aa11.77□□□□□ -0.53
PTPRF-214ENST00000496043 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.77□□□□□ -0.53
PTPRF-214ENST00000496043 C2orf92A0A1B0GVN3 265 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 CAPN14A8MX76 684 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 NPIPA2E9PIF3 369 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 NPIPA3F8WFD2 350 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 BCKDKO14874 412 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 NADKO95544 446 aaPredicted RBP11.76□□□□□ -0.53
PTPRF-214ENST00000496043 IGHG3P01860 377 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 SNRPB2P08579 225 aaKnown RBP11.76□□□□□ -0.53
PTPRF-214ENST00000496043 RPS17P08708 135 aaKnown RBP11.76□□□□□ -0.53
PTPRF-214ENST00000496043 ABHD2P08910 425 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 SBK3P0C264 359 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 CCL3P10147 92 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 DEKP35659 375 aaKnown RBP11.76□□□□□ -0.53
PTPRF-214ENST00000496043 HSD17B3P37058 310 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 PIGAP37287 484 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 DNASE1L1P49184 302 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 CDH13P55290 713 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 SLC37A1P57057 533 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 FOXO1Q12778 655 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 CDSNQ15517 529 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 HYAL4Q2M3T9 481 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 HLA-DQA1Q5Y7H0 255 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 LYPD8Q6UX82 237 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 METTL4Q8N3J2 472 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 FAM109AQ8N4B1 249 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 TMEM151AQ8N4L1 468 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 PAQR8Q8TEZ7 354 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 ZNF483Q8TF39 744 aaPredicted RBP11.76□□□□□ -0.53
PTPRF-214ENST00000496043 ASB5Q8WWX0 329 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 SELENOMQ8WWX9 145 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 RND1Q92730 232 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 TP53INP1Q96A56 240 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 SPACA9Q96E40 222 aaPredicted RBP11.76□□□□□ -0.53
PTPRF-214ENST00000496043 GAL3ST4Q96RP7 486 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 C1QTNF3Q9BXJ4 246 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 MRPL1Q9BYD6 325 aaKnown RBP11.76□□□□□ -0.53
PTPRF-214ENST00000496043 LDAHQ9H6V9 325 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 CXorf21Q9HAI6 301 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 TUBA8Q9NY65 449 aaPredicted RBP11.76□□□□□ -0.53
PTPRF-214ENST00000496043 PSME2Q9UL46 239 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 SLC12A4Q9UP95 1085 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 TEX15Q9BXT5 2789 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 CREBBPQ92793 2442 aa11.76□□□□□ -0.53
PTPRF-214ENST00000496043 PCNX1Q96RV3 2341 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 A0A0G2JMM0 328 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 A0A1B0GVC2 190 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 ATP6AP2A0A1C7CYW4 349 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 A0A1W2PPB8 328 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 A0A1W2PRS3 328 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 OR14I1A6ND48 311 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 A8MT66 165 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 KIR3DP1A8MWS1 328 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 PPP6CO00743 305 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 SUSD5O60279 629 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 ATP6AP2O75787 350 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 PDYNP01213 254 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 FBXO45P0C2W1 286 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 PORP16435 677 aaPredicted RBP11.75□□□□□ -0.53
PTPRF-214ENST00000496043 TNFRSF8P28908 595 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 MAGEA5P43359 124 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 KIR3DL1P43629 444 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 NR0B1P51843 470 aaKnown RBP11.75□□□□□ -0.53
PTPRF-214ENST00000496043 MAPK12P53778 367 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 CLCQ05315 142 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 PMPCAQ10713 525 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 EBPQ15125 230 aaKnown RBP11.75□□□□□ -0.53
PTPRF-214ENST00000496043 EMC4Q5J8M3 183 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 C6orf163Q5TEZ5 329 aa11.75□□□□□ -0.53
PTPRF-214ENST00000496043 ACAD11Q709F0 780 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms