RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 TRIM73Q86UV7 250 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 HIPK1Q86Z02 1210 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 ZDHHC13Q8IUH4 622 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 ZDHHC21Q8IVQ6 265 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 FAM20CQ8IXL6 584 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 GALNT4Q8N4A0 578 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 CSNK1A1LQ8N752 337 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 C19orf47Q8N9M1 422 aaKnown RBP9.69□□□□□ -0.86
HDAC3-214ENST00000495485 OR4K14Q8NGD5 310 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 PATE1Q8WXA2 126 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 SMIM10Q96HG1 83 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 RDH12Q96NR8 316 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 ZNF607Q96SK3 696 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 CIB1Q99828 191 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 SPATA5L1Q9BVQ7 753 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 CHRNA10Q9GZZ6 450 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 IKZF5Q9H5V7 419 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 COQ10BQ9H8M1 238 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 ANKHQ9HCJ1 492 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 CALML5Q9NZT1 146 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 GMPR2Q9P2T1 348 aaKnown RBP9.69□□□□□ -0.86
HDAC3-214ENST00000495485 SCOCQ9UIL1 159 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 MRPS33Q9Y291 106 aaKnown RBP9.69□□□□□ -0.86
HDAC3-214ENST00000495485 KLHL20Q9Y2M5 609 aa9.69□□□□□ -0.86
HDAC3-214ENST00000495485 LY6G6EA0A0G2JKS1 128 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 A0A0G2JN53 185 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 TLCD2A6NGC4 264 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 EMC8O43402 210 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 RASAL1O95294 804 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 FHP07954 510 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 CELA2BP08218 269 aaPredicted RBP9.68□□□□□ -0.86
HDAC3-214ENST00000495485 ARAFP10398 606 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 ZNF26P17031 533 aaPredicted RBP9.68□□□□□ -0.86
HDAC3-214ENST00000495485 TYRP1P17643 537 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 EFNA1P20827 205 aaPredicted RBP9.68□□□□□ -0.86
HDAC3-214ENST00000495485 CERS1P27544 350 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 ARL4DP49703 201 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 KHKP50053 298 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 MAZP56270 477 aaKnown RBP9.68□□□□□ -0.86
HDAC3-214ENST00000495485 CDK6Q00534 326 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 TNFRSF17Q02223 184 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 HSPB3Q12988 150 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 BIKQ13323 160 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 GK3PQ14409 553 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 RFX4Q33E94 735 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 GARNL3Q5VVW2 1013 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 SAXO2Q658L1 398 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 HMBOX1Q6NT76 420 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 CEACAM20Q6UY09 585 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 ZNF793Q6ZN11 406 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 CCDC80Q76M96 950 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 C6orf120Q7Z4R8 191 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 KRT73Q86Y46 540 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 PTOV1Q86YD1 416 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 PLXDC1Q8IUK5 500 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 APLFQ8IW19 511 aaPredicted RBP9.68□□□□□ -0.86
HDAC3-214ENST00000495485 ZC3H7AQ8IWR0 971 aaKnown RBP9.68□□□□□ -0.86
HDAC3-214ENST00000495485 KCT2Q8NC54 265 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 OR5K1Q8NHB7 308 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 IFI44Q8TCB0 444 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 PNPT1Q8TCS8 783 aaKnown RBP9.68□□□□□ -0.86
HDAC3-214ENST00000495485 TANKQ92844 425 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 TBC1D20Q96BZ9 403 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 SLC35G5Q96KT7 338 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 ZNF597Q96LX8 424 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 ZNF570Q96NI8 536 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 AMDHD1Q96NU7 426 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 TRAPPC9Q96Q05 1148 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 ZNF347Q96SE7 839 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 DOHHQ9BU89 302 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 CHST8Q9H2A9 424 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 CACYBPQ9HB71 228 aaKnown RBP9.68□□□□□ -0.86
HDAC3-214ENST00000495485 PDE7BQ9NP56 450 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 A4GALTQ9NPC4 353 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 TEX10Q9NXF1 929 aaPredicted RBP9.68□□□□□ -0.86
HDAC3-214ENST00000495485 IFT80Q9P2H3 777 aaPredicted RBP9.68□□□□□ -0.86
HDAC3-214ENST00000495485 LRIT1Q9P2V4 623 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 P2RX2Q9UBL9 471 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 PLCL2Q9UPR0 1127 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 USP22Q9UPT9 525 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 CLCA2Q9UQC9 943 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 MAP4K5Q9Y4K4 846 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 U3KQA8 63 aa9.68□□□□□ -0.86
HDAC3-214ENST00000495485 NUP214P35658 2090 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-214ENST00000495485 A0A1W2PR48 441 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 DCDC2BA2VCK2 349 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 DUXAA6NLW8 204 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 G3V2T6 193 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 PPM1DO15297 605 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 TOX3O15405 576 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-214ENST00000495485 DUX1O43812 170 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 DPM1O60762 260 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 CTSVO60911 334 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 E2F6O75461 281 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 TNFRSF21O75509 655 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 SERPINB7O75635 380 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 PRSS23O95084 383 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 AIFM1O95831 613 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 HPRP00739 348 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 IFI6P09912 130 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms