RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ADH7P40394 386 aa21.39■■□□□ 1.01
COL27A1-208ENST00000494780 RPS13P62277 151 aaKnown RBP21.39■■□□□ 1.01
COL27A1-208ENST00000494780 HERVK_113P63132 956 aa21.39■■□□□ 1.01
COL27A1-208ENST00000494780 ERVK-8P63133 956 aa21.39■■□□□ 1.01
COL27A1-208ENST00000494780 ZNF267Q14586 743 aaPredicted RBP21.39■■□□□ 1.01
COL27A1-208ENST00000494780 SETDB1Q15047 1291 aa21.39■■□□□ 1.01
COL27A1-208ENST00000494780 FAM83EQ2M2I3 478 aa21.39■■□□□ 1.01
COL27A1-208ENST00000494780 RIPPLY2Q5TAB7 128 aa21.39■■□□□ 1.01
COL27A1-208ENST00000494780 PRAMEF20Q5VT98 475 aa21.39■■□□□ 1.01
COL27A1-208ENST00000494780 MRM1Q6IN84 353 aaKnown RBP21.39■■□□□ 1.01
COL27A1-208ENST00000494780 RNF111Q6ZNA4 994 aa21.39■■□□□ 1.01
COL27A1-208ENST00000494780 CCDC25Q86WR0 208 aa21.39■■□□□ 1.01
COL27A1-208ENST00000494780 LIX1LQ8IVB5 337 aa21.39■■□□□ 1.01
COL27A1-208ENST00000494780 CENPLQ8N0S6 344 aaPredicted RBP21.39■■□□□ 1.01
COL27A1-208ENST00000494780 KCTD4Q8WVF5 259 aa21.39■■□□□ 1.01
COL27A1-208ENST00000494780 GAL3ST4Q96RP7 486 aa21.39■■□□□ 1.01
COL27A1-208ENST00000494780 ERVK-6Q9BXR3 956 aa21.39■■□□□ 1.01
COL27A1-208ENST00000494780 ZNF717Q9BY31 904 aaPredicted RBP21.39■■□□□ 1.01
COL27A1-208ENST00000494780 WWTR1Q9GZV5 400 aa21.39■■□□□ 1.01
COL27A1-208ENST00000494780 ACTR8Q9H981 624 aa21.39■■□□□ 1.01
COL27A1-208ENST00000494780 PROK2Q9HC23 129 aa21.39■■□□□ 1.01
COL27A1-208ENST00000494780 ALKBH4Q9NXW9 302 aa21.39■■□□□ 1.01
COL27A1-208ENST00000494780 ERVK-19Q9WJR5 959 aa21.39■■□□□ 1.01
COL27A1-208ENST00000494780 ASB4Q9Y574 426 aa21.39■■□□□ 1.01
COL27A1-208ENST00000494780 A0A0A6YYD5 115 aa21.38■■□□□ 1.01
COL27A1-208ENST00000494780 LRRC3CA6NJW4 275 aa21.38■■□□□ 1.01
COL27A1-208ENST00000494780 OR6C76A6NM76 312 aa21.38■■□□□ 1.01
COL27A1-208ENST00000494780 UGDHO60701 494 aa21.38■■□□□ 1.01
COL27A1-208ENST00000494780 PRKRAO75569 313 aaKnown RBP21.38■■□□□ 1.01
COL27A1-208ENST00000494780 ZWINTO95229 277 aa21.38■■□□□ 1.01
COL27A1-208ENST00000494780 BSGP35613 385 aa21.38■■□□□ 1.01
COL27A1-208ENST00000494780 SLC37A1P57057 533 aa21.38■■□□□ 1.01
COL27A1-208ENST00000494780 C2orf54Q08AI8 447 aa21.38■■□□□ 1.01
COL27A1-208ENST00000494780 CUL3Q13618 768 aa21.38■■□□□ 1.01
COL27A1-208ENST00000494780 EBPQ15125 230 aaKnown RBP21.38■■□□□ 1.01
COL27A1-208ENST00000494780 FAM13CQ8NE31 585 aa21.38■■□□□ 1.01
COL27A1-208ENST00000494780 OR10G3Q8NGC4 313 aa21.38■■□□□ 1.01
COL27A1-208ENST00000494780 FBXO25Q8TCJ0 367 aa21.38■■□□□ 1.01
COL27A1-208ENST00000494780 RIT1Q92963 219 aa21.38■■□□□ 1.01
COL27A1-208ENST00000494780 RAB17Q9H0T7 212 aa21.38■■□□□ 1.01
COL27A1-208ENST00000494780 DDX31Q9H8H2 851 aaKnown RBP21.38■■□□□ 1.01
COL27A1-208ENST00000494780 WDR41Q9HAD4 459 aa21.38■■□□□ 1.01
COL27A1-208ENST00000494780 PSD3Q9NYI0 1048 aa21.38■■□□□ 1.01
COL27A1-208ENST00000494780 L3MBTL1Q9Y468 752 aa21.38■■□□□ 1.01
COL27A1-208ENST00000494780 EEDO75530 441 aaKnown RBP21.37■■□□□ 1.01
COL27A1-208ENST00000494780 FAM58BPP0C7Q3 252 aa21.37■■□□□ 1.01
COL27A1-208ENST00000494780 NR2F6P10588 404 aa21.37■■□□□ 1.01
COL27A1-208ENST00000494780 GFAPP14136 432 aa21.37■■□□□ 1.01
COL27A1-208ENST00000494780 ALDH18A1P54886 795 aaKnown RBP21.37■■□□□ 1.01
COL27A1-208ENST00000494780 DLX5P56178 289 aa21.37■■□□□ 1.01
COL27A1-208ENST00000494780 ACAP2Q15057 778 aa21.37■■□□□ 1.01
COL27A1-208ENST00000494780 NTRK2Q16620 822 aa21.37■■□□□ 1.01
COL27A1-208ENST00000494780 PFKFB4Q16877 469 aa21.37■■□□□ 1.01
COL27A1-208ENST00000494780 CYP20A1Q6UW02 462 aa21.37■■□□□ 1.01
COL27A1-208ENST00000494780 TAGAPQ8N103 731 aa21.37■■□□□ 1.01
COL27A1-208ENST00000494780 NEIL3Q8TAT5 605 aa21.37■■□□□ 1.01
COL27A1-208ENST00000494780 DOK4Q8TEW6 326 aa21.37■■□□□ 1.01
COL27A1-208ENST00000494780 B4GALT7Q9UBV7 327 aa21.37■■□□□ 1.01
COL27A1-208ENST00000494780 CNOT11Q9UKZ1 510 aaKnown RBP21.37■■□□□ 1.01
COL27A1-208ENST00000494780 PYCARDQ9ULZ3 195 aa21.37■■□□□ 1.01
COL27A1-208ENST00000494780 SETD2Q9BYW2 2564 aaPredicted RBP21.36■■□□□ 1.01
COL27A1-208ENST00000494780 A0A1W2PR48 441 aa21.36■■□□□ 1.01
COL27A1-208ENST00000494780 ANKRD33BA6NCL7 494 aa21.36■■□□□ 1.01
COL27A1-208ENST00000494780 TMPRSS11DO60235 418 aa21.36■■□□□ 1.01
COL27A1-208ENST00000494780 C2P06681 752 aa21.36■■□□□ 1.01
COL27A1-208ENST00000494780 SLC35E2P0CK97 266 aa21.36■■□□□ 1.01
COL27A1-208ENST00000494780 ART1P52961 327 aa21.36■■□□□ 1.01
COL27A1-208ENST00000494780 IRF9Q00978 393 aa21.36■■□□□ 1.01
COL27A1-208ENST00000494780 PCBP2Q15366 365 aaKnown RBP eCLIP21.36■■□□□ 1.01
COL27A1-208ENST00000494780 TBCELQ5QJ74 424 aa21.36■■□□□ 1.01
COL27A1-208ENST00000494780 LIX1Q8N485 282 aa21.36■■□□□ 1.01
COL27A1-208ENST00000494780 DOHHQ9BU89 302 aa21.36■■□□□ 1.01
COL27A1-208ENST00000494780 SLC6A15Q9H2J7 730 aa21.36■■□□□ 1.01
COL27A1-208ENST00000494780 TNPO3Q9Y5L0 923 aaKnown RBP21.36■■□□□ 1.01
COL27A1-208ENST00000494780 GLOD5A6NK44 160 aa21.35■■□□□ 1.01
COL27A1-208ENST00000494780 WASHC1A8K0Z3 465 aa21.35■■□□□ 1.01
COL27A1-208ENST00000494780 HSPB2A8KAH6 182 aa21.35■■□□□ 1.01
COL27A1-208ENST00000494780 DNAJA1P31689 397 aaKnown RBP21.35■■□□□ 1.01
COL27A1-208ENST00000494780 PIK3CGP48736 1102 aa21.35■■□□□ 1.01
COL27A1-208ENST00000494780 GUCY2DQ02846 1103 aa21.35■■□□□ 1.01
COL27A1-208ENST00000494780 GTF2H2Q13888 395 aa21.35■■□□□ 1.01
COL27A1-208ENST00000494780 HSPB2Q16082 182 aa21.35■■□□□ 1.01
COL27A1-208ENST00000494780 CPSF6Q16630 551 aaKnown RBP eCLIP21.35■■□□□ 1.01
COL27A1-208ENST00000494780 GTF2H2CQ6P1K8 395 aa21.35■■□□□ 1.01
COL27A1-208ENST00000494780 METTL2BQ6P1Q9 378 aaKnown RBP21.35■■□□□ 1.01
COL27A1-208ENST00000494780 ARSKQ6UWY0 536 aa21.35■■□□□ 1.01
COL27A1-208ENST00000494780 ZDHHC24Q6UX98 284 aa21.35■■□□□ 1.01
COL27A1-208ENST00000494780 WDR53Q7Z5U6 358 aaPredicted RBP21.35■■□□□ 1.01
COL27A1-208ENST00000494780 NUDT13Q86X67 352 aa21.35■■□□□ 1.01
COL27A1-208ENST00000494780 ULK2Q8IYT8 1036 aa21.35■■□□□ 1.01
COL27A1-208ENST00000494780 ZNF441Q8N8Z8 693 aa21.35■■□□□ 1.01
COL27A1-208ENST00000494780 L3MBTL4Q8NA19 623 aa21.35■■□□□ 1.01
COL27A1-208ENST00000494780 WDR20Q8TBZ3 569 aa21.35■■□□□ 1.01
COL27A1-208ENST00000494780 TP53INP1Q96A56 240 aa21.35■■□□□ 1.01
COL27A1-208ENST00000494780 JSRP1Q96MG2 331 aaPredicted RBP21.35■■□□□ 1.01
COL27A1-208ENST00000494780 IPPKQ9H8X2 491 aa21.35■■□□□ 1.01
COL27A1-208ENST00000494780 MTORP42345 2549 aa21.34■■□□□ 1.01
COL27A1-208ENST00000494780 C2orf92A0A1B0GVN3 265 aa21.34■■□□□ 1.01
COL27A1-208ENST00000494780 CAPN14A8MX76 684 aa21.34■■□□□ 1.01
COL27A1-208ENST00000494780 FOXE1O00358 373 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms