RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 GIMAP4Q9NUV9 329 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 EXD2Q9NVH0 621 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 THEGQ9P2T0 379 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 MRPS17Q9Y2R5 130 aaKnown RBP10.05□□□□□ -0.8
CLCN6-208ENST00000494028 PCDHGA8Q9Y5G5 932 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 ORC6Q9Y5N6 252 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 ENPP4Q9Y6X5 453 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 XIRP2A4UGR9 3374 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 THADAQ6YHU6 1953 aa10.05□□□□□ -0.8
CLCN6-208ENST00000494028 NUP210LQ5VU65 1888 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 COL6A3P12111 3177 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 LOC105369274A0A096LPK9 316 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 LOC102723532A0A0G2JNH3 316 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 ZNF860A6NHJ4 632 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 METTL12A8MUP2 240 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 H0YGG7 62 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 J3KTA2 159 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 TNFRSF11BO00300 401 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 SLC28A2O43868 658 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 NDUFS2O75306 463 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 MFN2O95140 757 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 CPNE6O95741 557 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 IFNA14P01570 189 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 FHP07954 510 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 CHRM4P08173 479 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 C8orf89P0DMQ9 161 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 OR12D1P0DN82 309 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 CYP4B1P13584 511 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 CTSEP14091 401 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 ETS2P15036 469 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 JUNDP17535 347 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 CDH2P19022 906 aaPredicted RBP10.04□□□□□ -0.8
CLCN6-208ENST00000494028 POLR2IP36954 125 aaKnown RBP10.04□□□□□ -0.8
CLCN6-208ENST00000494028 MC3RP41968 323 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 OR1E2P47887 323 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 PXNP49023 591 aaPredicted RBP10.04□□□□□ -0.8
CLCN6-208ENST00000494028 CLK3P49761 638 aaKnown RBP10.04□□□□□ -0.8
CLCN6-208ENST00000494028 BLKP51451 505 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 TPD52P55327 224 aaPredicted RBP10.04□□□□□ -0.8
CLCN6-208ENST00000494028 GABARAPL2P60520 117 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 ARF3P61204 181 aaPredicted RBP10.04□□□□□ -0.8
CLCN6-208ENST00000494028 HHEXQ03014 270 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 RAPSNQ13702 412 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 LASP1Q14847 261 aaKnown RBP10.04□□□□□ -0.8
CLCN6-208ENST00000494028 EXOC3L2Q2M3D2 409 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 CYP27C1Q4G0S4 372 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 RBM48Q5RL73 367 aaKnown RBP10.04□□□□□ -0.8
CLCN6-208ENST00000494028 ZNF773Q6PK81 442 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 TMEM107Q6UX40 140 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 PRSS41Q7RTY9 318 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 SLC44A2Q8IWA5 706 aaPredicted RBP10.04□□□□□ -0.8
CLCN6-208ENST00000494028 RBM12BQ8IXT5 1001 aaKnown RBP10.04□□□□□ -0.8
CLCN6-208ENST00000494028 OR4N4Q8N0Y3 316 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 OR10G2Q8NGC3 310 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 BBS10Q8TAM1 723 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 ADAMTS16Q8TE57 1224 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 OTUB1Q96FW1 271 aaPredicted RBP10.04□□□□□ -0.8
CLCN6-208ENST00000494028 PIP5K1AQ99755 562 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 ING2Q9H160 280 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 PRDM9Q9NQV7 894 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 KRT84Q9NSB2 600 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 DDX18Q9NVP1 670 aaKnown RBP10.04□□□□□ -0.8
CLCN6-208ENST00000494028 KCMF1Q9P0J7 381 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 KCND3Q9UK17 655 aa10.04□□□□□ -0.8
CLCN6-208ENST00000494028 GPC6Q9Y625 555 aaPredicted RBP10.04□□□□□ -0.8
CLCN6-208ENST00000494028 COL5A1P20908 1838 aaPredicted RBP10.03□□□□□ -0.8
CLCN6-208ENST00000494028 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 LOC100130705A0A1B0GUX0 176 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 LILRA5A6NI73 299 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 SLC1A7O00341 560 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 EMC8O43402 210 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 B3GALT2O43825 422 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 KIF1CO43896 1103 aaKnown RBP10.03□□□□□ -0.8
CLCN6-208ENST00000494028 CSF2P04141 144 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 IFNW1P05000 195 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 ST6GAL1P15907 406 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 ITGA2P17301 1181 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 ALOX12P18054 663 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 CPN2P22792 545 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 CRHBPP24387 322 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 FEN1P39748 380 aaKnown RBP10.03□□□□□ -0.8
CLCN6-208ENST00000494028 BUD31P41223 144 aaPredicted RBP10.03□□□□□ -0.8
CLCN6-208ENST00000494028 ANXA11P50995 505 aaKnown RBP10.03□□□□□ -0.8
CLCN6-208ENST00000494028 ARHGDIAP52565 204 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 CDH12P55289 794 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 LIM2P55344 173 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 OLR1P78380 273 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 KCNC4Q03721 635 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 RUNX2Q13950 521 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 SYPL1Q16563 259 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 DEFB110Q30KQ9 67 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 DEFB134Q4QY38 66 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 LAIR1Q6GTX8 287 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 FAM111BQ6SJ93 734 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 ABHD13Q7L211 337 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 OLIG3Q7RTU3 272 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 IQCHQ86VS3 1027 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 COMTD1Q86VU5 262 aa10.03□□□□□ -0.8
CLCN6-208ENST00000494028 LRRC25Q8N386 305 aaPredicted RBP10.03□□□□□ -0.8
CLCN6-208ENST00000494028 ARHGEF39Q8N4T4 335 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms