RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 C16orf58Q96GQ5 468 aa3.09□□□□□ -1.91
ITGB1-216ENST00000493758 MCCC1Q96RQ3 725 aaPredicted RBP3.09□□□□□ -1.91
ITGB1-216ENST00000493758 CXXC4Q9H2H0 198 aa3.09□□□□□ -1.91
ITGB1-216ENST00000493758 FOXA2Q9Y261 457 aaPredicted RBP3.09□□□□□ -1.91
ITGB1-216ENST00000493758 ZFP37Q9Y6Q3 630 aaPredicted RBP3.09□□□□□ -1.91
ITGB1-216ENST00000493758 A0A1W2PRQ8 180 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 RHBDL1O75783 438 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 FCER2P06734 321 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 UMPSP11172 480 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 P4HA1P13674 534 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 VCLP18206 1134 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 KLK2P20151 261 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 FCARP24071 287 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 ID1P41134 155 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 HMGCS2P54868 508 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 GSTO1P78417 241 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 KRT31Q15323 416 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 P2RY14Q15391 338 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 TGIF1Q15583 401 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 WSCD2Q2TBF2 565 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 TMEM126BQ8IUX1 230 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 SYCP3Q8IZU3 236 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 SLC22A18ASQ8N1D0 253 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 THEM5Q8N1Q8 247 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 GDAP1Q8TB36 358 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 HAS2Q92819 552 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 GLYATL1Q969I3 302 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 PPP1R16AQ96I34 528 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 VNN3Q9NY84 501 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 ITM2BQ9Y287 266 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 RALGAPA1Q6GYQ0 2036 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 FGD5Q6ZNL6 1462 aa3.08□□□□□ -1.92
ITGB1-216ENST00000493758 CRCPO75575 148 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 TXNDC12O95881 172 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 KCNK10P57789 538 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 YWHAHQ04917 246 aaPredicted RBP3.07□□□□□ -1.92
ITGB1-216ENST00000493758 TTC31Q49AM3 519 aaPredicted RBP3.07□□□□□ -1.92
ITGB1-216ENST00000493758 SLC22A6Q4U2R8 563 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 MPPE1Q53F39 396 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 DDI2Q5TDH0 399 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 MARC1Q5VT66 337 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 MOB2Q70IA6 237 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 PARP8Q8N3A8 854 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 Q8N7P7 452 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 FBXO25Q8TCJ0 367 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 BCL2L2Q92843 193 aaPredicted RBP3.07□□□□□ -1.92
ITGB1-216ENST00000493758 SLCO4A1Q96BD0 722 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 B3GALT6Q96L58 329 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 CACNG6Q9BXT2 260 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 YTHDF1Q9BYJ9 559 aaKnown RBP3.07□□□□□ -1.92
ITGB1-216ENST00000493758 DEFB126Q9BYW3 111 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 GANQ9H2C0 597 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 IL1RAPL2Q9NP60 686 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 GDF3Q9NR23 364 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 DNAJC11Q9NVH1 559 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 IMPAD1Q9NX62 359 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 SPG21Q9NZD8 308 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 NYAP2Q9P242 653 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 Q9UF83 564 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 CELA1Q9UNI1 258 aa3.07□□□□□ -1.92
ITGB1-216ENST00000493758 A0A0A6YYD4 124 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 IGHV3-35A0A0C4DH35 117 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 A0A0U1RQK1 487 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 ZNF320A2RRD8 509 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 FAM220BPB1ANY3 271 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 LRRTM2O43300 516 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 GAS8O95995 478 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 IGHV3-9P01782 118 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 NUDT17P0C025 328 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 TPBGLP0DKB5 382 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 HSD17B1P14061 328 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 CALML3P27482 149 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 NDST1P52848 882 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 KRT83P78385 493 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 GIT2Q14161 759 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 ABRAXAS2Q15018 415 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 KRTAP13-3Q3SY46 172 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 GLRA4Q5JXX5 417 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 KIAA1217Q5T5P2 1943 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 GCNT7Q6ZNI0 430 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 PIWIL3Q7Z3Z3 882 aaKnown RBP3.06□□□□□ -1.92
ITGB1-216ENST00000493758 NAXDQ8IW45 347 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 VN1R17PQ8TDU5 208 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 CRYGNQ8WXF5 182 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 BADQ92934 168 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 PRAM1Q96QH2 718 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 DDX50Q9BQ39 737 aaKnown RBP3.06□□□□□ -1.92
ITGB1-216ENST00000493758 NTMT1Q9BV86 223 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 FUT8Q9BYC5 575 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 IL1RL2Q9HB29 575 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 ACOXLQ9NUZ1 547 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 EIF3KQ9UBQ5 218 aaKnown RBP3.06□□□□□ -1.92
ITGB1-216ENST00000493758 RSPH14Q9UHP6 348 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 EXOC7Q9UPT5 735 aa3.06□□□□□ -1.92
ITGB1-216ENST00000493758 SH3PXD2BA1X283 911 aa3.05□□□□□ -1.92
ITGB1-216ENST00000493758 ARPC1BO15143 372 aaKnown RBP3.05□□□□□ -1.92
ITGB1-216ENST00000493758 PSMD3O43242 534 aa3.05□□□□□ -1.92
ITGB1-216ENST00000493758 CALCAP01258 141 aa3.05□□□□□ -1.92
ITGB1-216ENST00000493758 UROSP10746 265 aa3.05□□□□□ -1.92
ITGB1-216ENST00000493758 SERPINB6P35237 376 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms