RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 MFN2O95140 757 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 ERGP11308 486 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 ANXA8P13928 327 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 TNNI3P19429 210 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 PEBP1P30086 187 aaKnown RBP11.79□□□□□ -0.52
HMGN1-220ENST00000492280 LIMS1P48059 325 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 HEPACAMQ14CZ8 416 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 COLEC12Q5KU26 742 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 FAM46CQ5VWP2 391 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 PAQR6Q6TCH4 344 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 TMEM107Q6UX40 140 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 TRIM73Q86UV7 250 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 HOMEZQ8IX15 550 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 YAF2Q8IY57 180 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 ZNF347Q96SE7 839 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 PHOX2BQ99453 314 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 SLIRPQ9GZT3 109 aaKnown RBP11.79□□□□□ -0.52
HMGN1-220ENST00000492280 RERGLQ9H628 205 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 FGF22Q9HCT0 170 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 AHSPQ9NZD4 102 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 ERGIC3Q9Y282 383 aa11.79□□□□□ -0.52
HMGN1-220ENST00000492280 CACNA1IQ9P0X4 2223 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 POM121BA6NF01 834 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 E9PQ18 207 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 KMOO15229 486 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 SLC22A1O15245 554 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 LRRTM2O43300 516 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 CDK1P06493 297 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 IGFALSP35858 605 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 RPL3P39023 403 aaKnown RBP11.78□□□□□ -0.52
HMGN1-220ENST00000492280 VASPP50552 380 aaPredicted RBP11.78□□□□□ -0.52
HMGN1-220ENST00000492280 PCBP4P57723 403 aaKnown RBP11.78□□□□□ -0.52
HMGN1-220ENST00000492280 MADCAM1Q13477 382 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 LTB4RQ15722 352 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 CARTPTQ16568 116 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 RGS21Q2M5E4 152 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 TPRG1LQ5T0D9 272 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 PTCHD4Q6ZW05 846 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 RTL10Q7L3V2 364 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 SFTPA2Q8IWL1 248 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 MFSD4AQ8N468 514 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 PSMA8Q8TAA3 256 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 APOBEC4Q8WW27 367 aaKnown RBP11.78□□□□□ -0.52
HMGN1-220ENST00000492280 ZG16BQ96DA0 208 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 RHBGQ9H310 441 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 WASH6PQ9NQA3 447 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 DPP7Q9UHL4 492 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 CLEC2DQ9UHP7 191 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 MAPRE3Q9UPY8 281 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 ICKQ9UPZ9 632 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 CAB39Q9Y376 341 aaPredicted RBP11.78□□□□□ -0.52
HMGN1-220ENST00000492280 RWDD3Q9Y3V2 267 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 TBC1D3DA0A087WVF3 549 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 TBC1D3IA0A087WXS9 549 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 TBC1D3EA0A087X179 549 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 TBC1D3KA0A087X1G2 549 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 TBC1D3FA6NER0 549 aaPredicted RBP11.78□□□□□ -0.52
HMGN1-220ENST00000492280 TBC1D3LB9A6J9 549 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 ENTPD6O75354 484 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 SULT1C4O75897 302 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 CEACAM5P06731 702 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 TBC1D3HP0C7X1 549 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 NR2F1P10589 423 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 ELAVL4P26378 380 aaKnown RBP11.78□□□□□ -0.52
HMGN1-220ENST00000492280 ARMCX4Q5H9R4 360 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 TBC1D3GQ6DHY5 549 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 OR4C11Q6IEV9 310 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 TBC1D3CQ6IPX1 549 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 IKBIPQ70UQ0 350 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 CCDC80Q76M96 950 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 TBC1D3Q8IZP1 549 aaPredicted RBP11.78□□□□□ -0.52
HMGN1-220ENST00000492280 SLC7A13Q8TCU3 470 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 RGMAQ96B86 450 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 COX4I2Q96KJ9 171 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 SLC35G5Q96KT7 338 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 SFXN1Q9H9B4 322 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 CCNB1IP1Q9NPC3 277 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 FTSJ1Q9UET6 329 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 NTNG1Q9Y2I2 539 aa11.78□□□□□ -0.52
HMGN1-220ENST00000492280 FUOMA2VDF0 154 aa11.77□□□□□ -0.52
HMGN1-220ENST00000492280 LRIT2A6NDA9 550 aa11.77□□□□□ -0.52
HMGN1-220ENST00000492280 BTN3A3O00478 584 aa11.77□□□□□ -0.52
HMGN1-220ENST00000492280 ITGA2P17301 1181 aa11.77□□□□□ -0.52
HMGN1-220ENST00000492280 HOXB6P17509 224 aaKnown RBP11.77□□□□□ -0.52
HMGN1-220ENST00000492280 RHCEP18577 417 aa11.77□□□□□ -0.52
HMGN1-220ENST00000492280 BUD31P41223 144 aaPredicted RBP11.77□□□□□ -0.52
HMGN1-220ENST00000492280 SOX3P41225 446 aa11.77□□□□□ -0.52
HMGN1-220ENST00000492280 RAB28P51157 221 aa11.77□□□□□ -0.52
HMGN1-220ENST00000492280 FUT5Q11128 374 aa11.77□□□□□ -0.52
HMGN1-220ENST00000492280 SLC13A2Q13183 592 aa11.77□□□□□ -0.52
HMGN1-220ENST00000492280 SLAMF1Q13291 335 aa11.77□□□□□ -0.52
HMGN1-220ENST00000492280 DGUOKQ16854 277 aa11.77□□□□□ -0.52
HMGN1-220ENST00000492280 C10orf62Q5T681 223 aaPredicted RBP11.77□□□□□ -0.52
HMGN1-220ENST00000492280 ZNF770Q6IQ21 691 aaPredicted RBP11.77□□□□□ -0.52
HMGN1-220ENST00000492280 ZNF554Q86TJ5 538 aa11.77□□□□□ -0.52
HMGN1-220ENST00000492280 TMEFF1Q8IYR6 380 aa11.77□□□□□ -0.52
HMGN1-220ENST00000492280 KCT2Q8NC54 265 aa11.77□□□□□ -0.52
HMGN1-220ENST00000492280 OR4E2Q8NGC2 313 aa11.77□□□□□ -0.52
HMGN1-220ENST00000492280 CREB3L4Q8TEY5 395 aa11.77□□□□□ -0.52
HMGN1-220ENST00000492280 OR5P2Q8WZ92 322 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms