RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ANKRD33BA6NCL7 494 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 HCRTR2O43614 444 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 NIPSNAP2O75323 286 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 ACTL6AO96019 429 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 CRHP06850 196 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 CDH1P12830 882 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 SLC25A16P16260 332 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 HNF1AP20823 631 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 KIR2DL2P43627 348 aaPredicted RBP6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 RAB8AP61006 207 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 BMPR2Q13873 1038 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 KLHL38Q2WGJ6 581 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 FASTKD1Q53R41 847 aaKnown RBP6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 TSTD2Q5T7W7 516 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 BICRALQ6AI39 1079 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 FAM166AQ6J272 317 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 DNAJC14Q6Y2X3 702 aaPredicted RBP6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 CCDC50Q8IVM0 306 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 REXO1L1PQ8IX06 675 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 C9orf40Q8IXQ3 194 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 TC2NQ8N9U0 490 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 OR52K1Q8NGK4 314 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 OR5L2Q8NGL0 311 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 OR14A16Q8NHC5 309 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 NUBPLQ8TB37 319 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 NT5CQ8TCD5 201 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 SMAP2Q8WU79 429 aaPredicted RBP6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 NEUROG1Q92886 237 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 DAZLQ92904 295 aaKnown RBP6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 FBXW5Q969U6 566 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 MSI2Q96DH6 328 aaKnown RBP6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 PGM2Q96G03 612 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 HS6ST2Q96MM7 605 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 BIRC8Q96P09 236 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 GNRHR2Q96P88 292 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 TRAF4Q9BUZ4 470 aaPredicted RBP6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 SPNS1Q9H2V7 528 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 CCDC177Q9NQR7 707 aaPredicted RBP6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 PRTFDC1Q9NRG1 225 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 HOMER3Q9NSC5 361 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 DDX56Q9NY93 547 aaKnown RBP6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 GALPQ9UBC7 116 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 HEY2Q9UBP5 337 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 VTI1BQ9UEU0 232 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 CLCA3PQ9Y6N3 262 aa6.41□□□□□ -1.38
PDLIM1-203ENST00000490391 COL7A1Q02388 2944 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 LOC100289279A0A1B0GTE1 492 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 FAM157AC9JC47 383 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 H0Y3Z8 333 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 H7C0C1 242 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 APOC4-APOC2K7ER74 178 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 NRDCO43847 1150 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 APOC2P02655 101 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 IGKV3-11P04433 115 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 H2AFZP0C0S5 128 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 CD8BP10966 210 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 PAMP19021 973 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 TBXA2RP21731 343 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 CHMP24386 653 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 DPP4P27487 766 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 PPARGP37231 505 aaPredicted RBP6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 ATP5OP48047 213 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 TTPAP49638 278 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 GZMKP49863 264 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 CCZ1BP86790 482 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 CCZ1P86791 482 aaPredicted RBP6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 FUT7Q11130 342 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 FAPQ12884 760 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 NTRK2Q16620 822 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 AARS2Q5JTZ9 985 aaKnown RBP6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 ABHD17CQ6PCB6 329 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 SBSNQ6UWP8 590 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 BBS12Q6ZW61 710 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 H2AFVQ71UI9 128 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 STRA8Q7Z7C7 330 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 CLNKQ7Z7G1 428 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 YRDCQ86U90 279 aaKnown RBP6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 DTX2Q86UW9 622 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 C17orf64Q86WR6 236 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 LRRC6Q86X45 466 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 WFDC3Q8IUB2 231 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 FAM13CQ8NE31 585 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 FAM83FQ8NEG4 500 aaPredicted RBP6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 ABHD11Q8NFV4 315 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 OR4K1Q8NGD4 311 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 GABPB2Q8TAK5 448 aaPredicted RBP6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 SLC2A12Q8TD20 617 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 ZNF721Q8TF20 911 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 ASB11Q8WXH4 323 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 FAM136AQ96C01 138 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 PPP1R2P1Q96PQ5 205 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 SLC39A3Q9BRY0 314 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 KLHL31Q9H511 634 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 MANSC1Q9H8J5 431 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 LRRC40Q9H9A6 602 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 CATSPERZQ9NTU4 200 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 ZNF148Q9UQR1 794 aa6.4□□□□□ -1.38
PDLIM1-203ENST00000490391 MYOCOSA0A1B0GUC4 107 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 TRBC2A0A5B9 178 aa6.39□□□□□ -1.39
PDLIM1-203ENST00000490391 PLOD2O00469 737 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms