RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 GATA1P15976 413 aaPredicted RBP3.14□□□□□ -1.91
CD46-216ENST00000490278 CAPN2P17655 700 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 IL4RP24394 825 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 ATP6V1E1P36543 226 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 TNFRSF4P43489 277 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 ACADSBP45954 432 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 ITPK1Q13572 414 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 EMC2Q15006 297 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 GPAT3Q53EU6 434 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 HIST2H2AA3Q6FI13 130 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 EMBQ6PCB8 327 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 DLEU7Q6UYE1 221 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 RABEPKQ7Z6M1 372 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 SLC25A42Q86VD7 318 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 SAMD12Q8N8I0 201 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 CSNK1G2-AS1Q8NCQ2 148 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 CHDHQ8NE62 594 aaPredicted RBP3.14□□□□□ -1.91
CD46-216ENST00000490278 OR2L2Q8NH16 312 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 OR4F5Q8NH21 305 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 FBXO25Q8TCJ0 367 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 URGCPQ8TCY9 931 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 TOMM40LQ969M1 308 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 PNPLA2Q96AD5 504 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 COG3Q96JB2 828 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 SPATA13Q96N96 652 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 DDX47Q9H0S4 455 aaKnown RBP3.14□□□□□ -1.91
CD46-216ENST00000490278 CARD9Q9H257 536 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 DBNDD1Q9H9R9 158 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 SLC25A19Q9HC21 320 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 ERVK-18Q9QC07 812 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 EIF3KQ9UBQ5 218 aaKnown RBP3.14□□□□□ -1.91
CD46-216ENST00000490278 ZNF346Q9UL40 294 aaKnown RBP3.14□□□□□ -1.91
CD46-216ENST00000490278 FBXO7Q9Y3I1 522 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 CSAG2Q9Y5P2 127 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 CPQQ9Y646 472 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 STYXL1Q9Y6J8 313 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 COL5A2P05997 1499 aaPredicted RBP3.14□□□□□ -1.91
CD46-216ENST00000490278 KIF7Q2M1P5 1343 aa3.14□□□□□ -1.91
CD46-216ENST00000490278 A0A1B0GTH9 108 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 TEX48A0A1B0GUV7 120 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 SLC9B1P1A6NJY1 282 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 RNF212BA8MTL3 300 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 ZBTB14O43829 449 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 NME2P1O60361 137 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 GALR3O60755 368 aaPredicted RBP3.13□□□□□ -1.91
CD46-216ENST00000490278 BCAS2O75934 225 aaPredicted RBP3.13□□□□□ -1.91
CD46-216ENST00000490278 REC8O95072 547 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 SEMA4FO95754 770 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 APRTP07741 180 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 HCKP08631 526 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 FOSL2P15408 326 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 MARCKSP29966 332 aaPredicted RBP3.13□□□□□ -1.91
CD46-216ENST00000490278 TKTL1P51854 596 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 HNRNPFP52597 415 aaKnown RBP3.13□□□□□ -1.91
CD46-216ENST00000490278 COX10Q12887 443 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 KLF5Q13887 457 aaPredicted RBP3.13□□□□□ -1.91
CD46-216ENST00000490278 CCL14Q16627 93 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 AGAP7PQ5VUJ5 663 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 STEAP1BQ6NZ63 245 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 PLBD1Q6P4A8 553 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 LRRC49Q8IUZ0 686 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 CCDC71Q8IV32 467 aaPredicted RBP3.13□□□□□ -1.91
CD46-216ENST00000490278 LINC00518Q8N0U6 118 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 RELL2Q8NC24 303 aaPredicted RBP3.13□□□□□ -1.91
CD46-216ENST00000490278 NEK11Q8NG66 645 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 OR4Q3Q8NH05 313 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 EXOC6Q8TAG9 804 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 RDH11Q8TC12 318 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 CAPNS2Q96L46 248 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 JPH2Q9BR39 696 aaPredicted RBP3.13□□□□□ -1.91
CD46-216ENST00000490278 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 PUS3Q9BZE2 481 aaKnown RBP3.13□□□□□ -1.91
CD46-216ENST00000490278 NDUFA13Q9P0J0 144 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 IL19Q9UHD0 177 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 FAM153AQ9UHL3 310 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 MOSPD1Q9UJG1 213 aa3.13□□□□□ -1.91
CD46-216ENST00000490278 STRAPQ9Y3F4 350 aaKnown RBP3.13□□□□□ -1.91
CD46-216ENST00000490278 SPAG9O60271 1321 aaKnown RBP3.13□□□□□ -1.91
CD46-216ENST00000490278 IGKV3D-20A0A0C4DH25 116 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 ARPC1BO15143 372 aaKnown RBP3.12□□□□□ -1.91
CD46-216ENST00000490278 MT-ND1P03886 318 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 HIST1H2AGP0C0S8 130 aaPredicted RBP3.12□□□□□ -1.91
CD46-216ENST00000490278 CCDC159P0C7I6 412 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 STMN1P16949 149 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 CALML3P27482 149 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 NDST1P52848 882 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 CASP9P55211 416 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 YBEYP58557 167 aaPredicted RBP3.12□□□□□ -1.91
CD46-216ENST00000490278 SRP54P61011 504 aaKnown RBP3.12□□□□□ -1.91
CD46-216ENST00000490278 SSTP61278 116 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 RPS4XP62701 263 aaKnown RBP3.12□□□□□ -1.91
CD46-216ENST00000490278 GSTO1P78417 241 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 ZFP36L1Q07352 338 aaKnown RBP3.12□□□□□ -1.91
CD46-216ENST00000490278 SLC1A5Q15758 541 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 TMEM44Q2T9K0 475 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 UNC50Q53HI1 259 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 TCTEX1D4Q5JR98 221 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 LIPJQ5W064 366 aa3.12□□□□□ -1.91
CD46-216ENST00000490278 WDR25Q64LD2 544 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms