RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 GIMAP5Q96F15 307 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 TBX5Q99593 518 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 KIF13AQ9H1H9 1805 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 PSMD9O00233 223 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 IL4RP24394 825 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 GDI2P50395 445 aaKnown RBP8.48□□□□□ -1.05
LSAMP-205ENST00000490035 TMEM198Q66K66 360 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 GDF6Q6KF10 455 aaPredicted RBP8.48□□□□□ -1.05
LSAMP-205ENST00000490035 DCP2Q8IU60 420 aaKnown RBP8.48□□□□□ -1.05
LSAMP-205ENST00000490035 TANKQ92844 425 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 WDR92Q96MX6 357 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 CDCA3Q99618 268 aaPredicted RBP8.48□□□□□ -1.05
LSAMP-205ENST00000490035 FN3KQ9H479 309 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 ALKBH4Q9NXW9 302 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 ENTPD2Q9Y5L3 495 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 TIAM2Q8IVF5 1701 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 LEFTY2O00292 366 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 IL33O95760 270 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 ASGR2P07307 311 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 PCBP2Q15366 365 aaKnown RBP eCLIP8.48□□□□□ -1.05
LSAMP-205ENST00000490035 HAGHLQ6PII5 290 aaPredicted RBP8.48□□□□□ -1.05
LSAMP-205ENST00000490035 RNF111Q6ZNA4 994 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 TMED4Q7Z7H5 227 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 OR5AK3PQ8NH89 298 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 SNAPC3Q92966 411 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 MYRFLQ96LU7 910 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 NFS1Q9Y697 457 aa8.48□□□□□ -1.05
LSAMP-205ENST00000490035 FGF18O76093 207 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 IRF2P14316 349 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 RABIFP47224 123 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 CASP6P55212 293 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 S100A10P60903 97 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 FAM69AQ5T7M9 428 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 KIF18BQ86Y91 864 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 SMPDL3BQ92485 455 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 PELI2Q9HAT8 420 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 AIG1Q9NVV5 245 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 TMX2-CTNND1H3BSU7 103 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 GTF2F2P13984 249 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 HMGCLP35914 325 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 PREPP48147 710 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 RGS19P49795 217 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 CXCR4P61073 352 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 ARF3P61204 181 aaPredicted RBP8.47□□□□□ -1.05
LSAMP-205ENST00000490035 ARF1P84077 181 aaKnown RBP8.47□□□□□ -1.05
LSAMP-205ENST00000490035 PRKCZQ05513 592 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 BNIP3Q12983 259 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 SLAMF1Q13291 335 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 OR4E2Q8NGC2 313 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 OR5J2Q8NH18 312 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 SPTSSAQ969W0 71 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 ISG20Q96AZ6 181 aaKnown RBP8.47□□□□□ -1.05
LSAMP-205ENST00000490035 LGALS12Q96DT0 336 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 OR5B12Q96R08 314 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 C2orf42Q9NWW7 574 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 EXTL2Q9UBQ6 330 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 ADAM18Q9Y3Q7 739 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 SOX1O00570 391 aaPredicted RBP8.47□□□□□ -1.05
LSAMP-205ENST00000490035 CCL22O00626 93 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 VILLO15195 856 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 PRAMEF2O60811 474 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 IFNA4P05014 189 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 BMP2P12643 396 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 ART1P52961 327 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 FOXK1P85037 733 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 GINS1Q14691 196 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 SAMD12Q8N8I0 201 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 ATG5Q9H1Y0 275 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 HSPB11Q9Y547 144 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 PCDHAC2Q9Y5I4 1007 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 A6NIZ1 184 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 ZNF217O75362 1048 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 ZNF8P17098 575 aaPredicted RBP8.47□□□□□ -1.05
LSAMP-205ENST00000490035 PRKXP51817 358 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 RAP1BP61224 184 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 RAP1AP62834 184 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 KIAA0895LQ68EN5 471 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 PNCKQ6P2M8 343 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 ZNF704Q6ZNC4 412 aaPredicted RBP8.47□□□□□ -1.05
LSAMP-205ENST00000490035 NETO2Q8NC67 525 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 IRF2BPLQ9H1B7 796 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 RGCCQ9H4X1 137 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 A0A1W2PPW3 197 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 ZSCAN5BA6NJL1 495 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 CCND3P30281 292 aaPredicted RBP8.47□□□□□ -1.05
LSAMP-205ENST00000490035 TREML1Q86YW5 311 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 CBARPQ8N350 705 aaPredicted RBP8.47□□□□□ -1.05
LSAMP-205ENST00000490035 FZD1Q9UP38 647 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 RPP14O95059 124 aaKnown RBP8.47□□□□□ -1.05
LSAMP-205ENST00000490035 SCGB1D2O95969 90 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 SLC39A4Q6P5W5 647 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 GSG1LQ6UXU4 331 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 UTS2BQ765I0 119 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 KIAA0907Q7Z7F0 614 aaPredicted RBP8.47□□□□□ -1.05
LSAMP-205ENST00000490035 PIM3Q86V86 326 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 OR5T2Q8NGG2 359 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 ADAMTS16Q8TE57 1224 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 CYB5D2Q8WUJ1 264 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 SGTBQ96EQ0 304 aa8.47□□□□□ -1.05
LSAMP-205ENST00000490035 MAELQ96JY0 434 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms