RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 ZZZ3Q8IYH5 903 aa20.35■□□□□ 0.85
SMC4-221ENST00000489573 OR9A2Q8NGT5 310 aa20.35■□□□□ 0.85
SMC4-221ENST00000489573 PYDC1Q8WXC3 89 aa20.35■□□□□ 0.85
SMC4-221ENST00000489573 TBC1D20Q96BZ9 403 aa20.35■□□□□ 0.85
SMC4-221ENST00000489573 CDC6Q99741 560 aa20.35■□□□□ 0.85
SMC4-221ENST00000489573 TMEM121BQ9BXQ6 578 aaPredicted RBP20.35■□□□□ 0.85
SMC4-221ENST00000489573 S100A14Q9HCY8 104 aa20.35■□□□□ 0.85
SMC4-221ENST00000489573 AGRPO00253 132 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 HYAL3O43820 417 aaPredicted RBP20.34■□□□□ 0.85
SMC4-221ENST00000489573 KCNK5O95279 499 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 PORP16435 677 aaPredicted RBP20.34■□□□□ 0.85
SMC4-221ENST00000489573 PTGER1P34995 402 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 MRPS22P82650 360 aaKnown RBP20.34■□□□□ 0.85
SMC4-221ENST00000489573 DSG2Q14126 1118 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 MAP7Q14244 749 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 SNCBQ16143 134 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 COX20Q5RI15 118 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 SPPL2CQ8IUH8 684 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 ANKRD9Q96BM1 317 aaPredicted RBP20.34■□□□□ 0.85
SMC4-221ENST00000489573 MOAP1Q96BY2 351 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 NSMCE2Q96MF7 247 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 PHOX2BQ99453 314 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 ZCCHC3Q9NUD5 404 aaKnown RBP20.34■□□□□ 0.85
SMC4-221ENST00000489573 MAP4K5Q9Y4K4 846 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 TCRBV3S1A0A5B6 114 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 CXCR6O00574 342 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 XCR1P46094 333 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 OR1D4P47884 311 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 PDX1P52945 283 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 POLE2P56282 527 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 AP2B1P63010 937 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 RHDQ02161 417 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 C16orf72Q14CZ0 275 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 VMACQ2NL98 169 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 TMEM107Q6UX40 140 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 SZRD1Q7Z422 152 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 C6orf120Q7Z4R8 191 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 PTOV1Q86YD1 416 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 ENDOVQ8N8Q3 282 aaKnown RBP20.34■□□□□ 0.85
SMC4-221ENST00000489573 AGBL5Q8NDL9 886 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 FIG4Q92562 907 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 SLC7A5P2Q9GIP4 190 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 PRTFDC1Q9NRG1 225 aa20.34■□□□□ 0.85
SMC4-221ENST00000489573 NUP214P35658 2090 aaPredicted RBP20.33■□□□□ 0.85
SMC4-221ENST00000489573 EFCAB7A8K855 629 aa20.33■□□□□ 0.84
SMC4-221ENST00000489573 CLDN4O14493 209 aa20.33■□□□□ 0.84
SMC4-221ENST00000489573 B4GALT2O60909 372 aa20.33■□□□□ 0.84
SMC4-221ENST00000489573 FHP07954 510 aa20.33■□□□□ 0.84
SMC4-221ENST00000489573 ETFAP13804 333 aa20.33■□□□□ 0.84
SMC4-221ENST00000489573 FBLP22087 321 aaKnown RBP20.33■□□□□ 0.84
SMC4-221ENST00000489573 MC3RP41968 323 aa20.33■□□□□ 0.84
SMC4-221ENST00000489573 CASP9P55211 416 aa20.33■□□□□ 0.84
SMC4-221ENST00000489573 ILKQ13418 452 aa20.33■□□□□ 0.84
SMC4-221ENST00000489573 TP53BP2Q13625 1128 aa20.33■□□□□ 0.84
SMC4-221ENST00000489573 LTB4RQ15722 352 aa20.33■□□□□ 0.84
SMC4-221ENST00000489573 ADRM1Q16186 407 aa20.33■□□□□ 0.84
SMC4-221ENST00000489573 GCNT6Q5T4J0 391 aa20.33■□□□□ 0.84
SMC4-221ENST00000489573 RHBDD2Q6NTF9 364 aa20.33■□□□□ 0.84
SMC4-221ENST00000489573 ZFP1Q6P2D0 407 aa20.33■□□□□ 0.84
SMC4-221ENST00000489573 BHLHB9Q6PI77 547 aa20.33■□□□□ 0.84
SMC4-221ENST00000489573 RBM44Q6ZP01 1051 aaKnown RBP20.33■□□□□ 0.84
SMC4-221ENST00000489573 BPHLQ86WA6 291 aaPredicted RBP20.33■□□□□ 0.84
SMC4-221ENST00000489573 TMEM126BQ8IUX1 230 aa20.33■□□□□ 0.84
SMC4-221ENST00000489573 GOLM1Q8NBJ4 401 aa20.33■□□□□ 0.84
SMC4-221ENST00000489573 OR56A1Q8NGH5 318 aa20.33■□□□□ 0.84
SMC4-221ENST00000489573 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.33■□□□□ 0.84
SMC4-221ENST00000489573 COL26A1Q96A83 441 aa20.33■□□□□ 0.84
SMC4-221ENST00000489573 ELP4Q96EB1 424 aa20.33■□□□□ 0.84
SMC4-221ENST00000489573 ZNF304Q9HCX3 659 aa20.33■□□□□ 0.84
SMC4-221ENST00000489573 OCIAD1Q9NX40 245 aa20.33■□□□□ 0.84
SMC4-221ENST00000489573 SPTBP11277 2137 aa20.32■□□□□ 0.84
SMC4-221ENST00000489573 EMC8O43402 210 aa20.32■□□□□ 0.84
SMC4-221ENST00000489573 CTNSO60931 367 aa20.32■□□□□ 0.84
SMC4-221ENST00000489573 TNFRSF21O75509 655 aa20.32■□□□□ 0.84
SMC4-221ENST00000489573 ATP1B1P05026 303 aa20.32■□□□□ 0.84
SMC4-221ENST00000489573 NUDT7P0C024 238 aa20.32■□□□□ 0.84
SMC4-221ENST00000489573 PRR5P85299 388 aa20.32■□□□□ 0.84
SMC4-221ENST00000489573 SLC13A2Q13183 592 aa20.32■□□□□ 0.84
SMC4-221ENST00000489573 MTX3Q5HYI7 312 aa20.32■□□□□ 0.84
SMC4-221ENST00000489573 C1orf189Q5VU69 101 aa20.32■□□□□ 0.84
SMC4-221ENST00000489573 PPP1R3BQ86XI6 285 aa20.32■□□□□ 0.84
SMC4-221ENST00000489573 NCLNQ969V3 563 aa20.32■□□□□ 0.84
SMC4-221ENST00000489573 MAGED4Q96JG8 741 aa20.32■□□□□ 0.84
SMC4-221ENST00000489573 SLC35G5Q96KT7 338 aa20.32■□□□□ 0.84
SMC4-221ENST00000489573 OR1F2PQ96R84 312 aa20.32■□□□□ 0.84
SMC4-221ENST00000489573 GORASP2Q9H8Y8 452 aa20.32■□□□□ 0.84
SMC4-221ENST00000489573 C3orf14Q9HBI5 128 aa20.32■□□□□ 0.84
SMC4-221ENST00000489573 NKX1-2Q9UD57 310 aaPredicted RBP20.32■□□□□ 0.84
SMC4-221ENST00000489573 FAF1Q9UNN5 650 aaPredicted RBP20.32■□□□□ 0.84
SMC4-221ENST00000489573 RFPL3O75679 317 aa20.31■□□□□ 0.84
SMC4-221ENST00000489573 SCRG1O75711 98 aa20.31■□□□□ 0.84
SMC4-221ENST00000489573 CDC123O75794 336 aaPredicted RBP20.31■□□□□ 0.84
SMC4-221ENST00000489573 BMP2P12643 396 aa20.31■□□□□ 0.84
SMC4-221ENST00000489573 TGM1P22735 817 aa20.31■□□□□ 0.84
SMC4-221ENST00000489573 CCKBRP32239 447 aa20.31■□□□□ 0.84
SMC4-221ENST00000489573 PCGF2P35227 344 aa20.31■□□□□ 0.84
SMC4-221ENST00000489573 HSD17B7P56937 341 aa20.31■□□□□ 0.84
SMC4-221ENST00000489573 E2F1Q01094 437 aa20.31■□□□□ 0.84
SMC4-221ENST00000489573 ERV3-1Q14264 604 aa20.31■□□□□ 0.84
SMC4-221ENST00000489573 ARHGAP40Q5TG30 622 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms