RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 OPN5Q6U736 354 aa12.53□□□□□ -0.4
LMO4-203ENST00000489303 IL20RBQ6UXL0 311 aa12.53□□□□□ -0.4
LMO4-203ENST00000489303 RNF111Q6ZNA4 994 aa12.53□□□□□ -0.4
LMO4-203ENST00000489303 SH2D5Q6ZV89 423 aa12.53□□□□□ -0.4
LMO4-203ENST00000489303 SLC29A4Q7RTT9 530 aa12.53□□□□□ -0.4
LMO4-203ENST00000489303 C1orf52Q8N6N3 182 aaKnown RBP12.53□□□□□ -0.4
LMO4-203ENST00000489303 OR2W6PQ8NHA6 318 aa12.53□□□□□ -0.4
LMO4-203ENST00000489303 NUBPLQ8TB37 319 aa12.53□□□□□ -0.4
LMO4-203ENST00000489303 SLC22A8Q8TCC7 542 aa12.53□□□□□ -0.4
LMO4-203ENST00000489303 FBXL20Q96IG2 436 aa12.53□□□□□ -0.4
LMO4-203ENST00000489303 RASL10BQ96S79 203 aa12.53□□□□□ -0.4
LMO4-203ENST00000489303 HBEGFQ99075 208 aa12.53□□□□□ -0.4
LMO4-203ENST00000489303 GSTO2Q9H4Y5 243 aa12.53□□□□□ -0.4
LMO4-203ENST00000489303 LIN28AQ9H9Z2 209 aaKnown RBP12.53□□□□□ -0.4
LMO4-203ENST00000489303 RYDENQ9NUL5 291 aaKnown RBP12.53□□□□□ -0.4
LMO4-203ENST00000489303 TEX10Q9NXF1 929 aaPredicted RBP12.53□□□□□ -0.4
LMO4-203ENST00000489303 CSMD1Q96PZ7 3565 aa12.53□□□□□ -0.4
LMO4-203ENST00000489303 POLEQ07864 2286 aa12.53□□□□□ -0.4
LMO4-203ENST00000489303 NPIPA5E9PKD4 350 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 PGRMC2O15173 223 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 PEX1O43933 1283 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 ZG16O60844 167 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 PRF1P14222 555 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 MST1P26927 711 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 XKP51811 444 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 KCNK10P57789 538 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 ERVK-8P63133 956 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 SLC18A2Q05940 514 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 ACSM2AQ08AH3 577 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 GALNT1Q10472 559 aaPredicted RBP12.52□□□□□ -0.41
LMO4-203ENST00000489303 TBL3Q12788 808 aaKnown RBP12.52□□□□□ -0.41
LMO4-203ENST00000489303 IMPG1Q17R60 797 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 MPEG1Q2M385 716 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 SPIN4Q56A73 249 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 TCHHL1Q5QJ38 904 aaPredicted RBP12.52□□□□□ -0.41
LMO4-203ENST00000489303 C1QL3Q5VWW1 255 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 ACSM2BQ68CK6 577 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 SULF2Q8IWU5 870 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 GALNT12Q8IXK2 581 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 ZNF321PQ8N8H1 164 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 AGAP11Q8TF27 550 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 AENQ8WTP8 325 aaKnown RBP12.52□□□□□ -0.41
LMO4-203ENST00000489303 SREK1Q8WXA9 508 aaKnown RBP12.52□□□□□ -0.41
LMO4-203ENST00000489303 CAVIN3Q969G5 261 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 MAGED4Q96JG8 741 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 SGCZQ96LD1 299 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 FRMD6Q96NE9 622 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 OXSMQ9NWU1 459 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.52□□□□□ -0.41
LMO4-203ENST00000489303 MCM8Q9UJA3 840 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 NPIPA1Q9UND3 350 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 ERVK-19Q9WJR5 959 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 TIMM22Q9Y584 194 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 PCDHA9Q9Y5H5 950 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 V9GYY5 206 aaPredicted RBP12.52□□□□□ -0.41
LMO4-203ENST00000489303 ZGRF1Q86YA3 2104 aa12.52□□□□□ -0.41
LMO4-203ENST00000489303 TRGV8A0A0C4DH27 118 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 GNG14A0A1W2PPG7 69 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 TMEM200CA6NKL6 621 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 OR6C76A6NM76 312 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 WASHC1A8K0Z3 465 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 ERAL1O75616 437 aaKnown RBP12.51□□□□□ -0.41
LMO4-203ENST00000489303 OR6B1O95007 311 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 IGKV3-11P04433 115 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 TUBBP07437 444 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 STSP08842 583 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 PORP16435 677 aaPredicted RBP12.51□□□□□ -0.41
LMO4-203ENST00000489303 NT5EP21589 574 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 SOX3P41225 446 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 ALDH9A1P49189 494 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 MEOX1P50221 254 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 PIGGQ5H8A4 983 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 SPDYAQ5MJ70 313 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 LIPMQ5VYY2 423 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 HLA-DQA1Q5Y7H0 255 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 SLC48A1Q6P1K1 146 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 C16orf47Q6ZP98 133 aaPredicted RBP12.51□□□□□ -0.41
LMO4-203ENST00000489303 RTL4Q6ZR62 310 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 FRMD7Q6ZUT3 714 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 FJX1Q86VR8 437 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 ZNF227Q86WZ6 799 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 CPSF7Q8N684 471 aaKnown RBP12.51□□□□□ -0.41
LMO4-203ENST00000489303 SLC15A4Q8N697 577 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 PSD4Q8NDX1 1056 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 CHTF18Q8WVB6 975 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 TM4SF18Q96CE8 201 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 APOPT1Q96IL0 206 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 GPR137Q96N19 417 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 GAL3ST4Q96RP7 486 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 SMC6Q96SB8 1091 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 ACPTQ9BZG2 426 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 SUCOQ9UBS9 1254 aaKnown RBP12.51□□□□□ -0.41
LMO4-203ENST00000489303 ZNF780BQ9Y6R6 833 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 SVILO95425 2214 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 MYO9AB2RTY4 2548 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 LRBAP50851 2863 aa12.51□□□□□ -0.41
LMO4-203ENST00000489303 SERTM1A2A2V5 107 aa12.5□□□□□ -0.41
LMO4-203ENST00000489303 TFECO14948 347 aaPredicted RBP12.5□□□□□ -0.41
LMO4-203ENST00000489303 PCDH7O60245 1069 aa12.5□□□□□ -0.41
LMO4-203ENST00000489303 P04436 131 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms