RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 TENM4Q6N022 2769 aa13.27□□□□□ -0.29
BRCA1-218ENST00000489037 UBR5O95071 2799 aaPredicted RBP13.26□□□□□ -0.29
BRCA1-218ENST00000489037 OR6C76A6NM76 312 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 WASHC1A8K0Z3 465 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 UBFD1O14562 309 aaKnown RBP13.26□□□□□ -0.29
BRCA1-218ENST00000489037 PRKNO60260 465 aaPredicted RBP13.26□□□□□ -0.29
BRCA1-218ENST00000489037 NME2P1O60361 137 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 ERAL1O75616 437 aaKnown RBP13.26□□□□□ -0.29
BRCA1-218ENST00000489037 MYZAPP0CAP1 466 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 DRD2P14416 443 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 CHN1P15882 459 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 NT5EP21589 574 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 NME2P22392 152 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 GSTM5P46439 218 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 HK2P52789 917 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 HMGCS1Q01581 520 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 ALDH6A1Q02252 535 aaKnown RBP13.26□□□□□ -0.29
BRCA1-218ENST00000489037 RBPJQ06330 500 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 PCLAFQ15004 111 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 ZNF468Q5VIY5 522 aaPredicted RBP13.26□□□□□ -0.29
BRCA1-218ENST00000489037 HLA-DQA1Q5Y7H0 255 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 SLC48A1Q6P1K1 146 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 OPN5Q6U736 354 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 IL20RBQ6UXL0 311 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 GFRALQ6UXV0 394 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 ZNF321PQ8N8H1 164 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 NUBPLQ8TB37 319 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 SLC22A8Q8TCC7 542 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 KLHL29Q96CT2 875 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 SLX1AQ9BQ83 275 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 GATA5Q9BWX5 397 aaPredicted RBP13.26□□□□□ -0.29
BRCA1-218ENST00000489037 HES7Q9BYE0 225 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 SHCBP1LQ9BZQ2 653 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 CENPHQ9H3R5 247 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 PFDN4Q9NQP4 134 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 RYDENQ9NUL5 291 aaKnown RBP13.26□□□□□ -0.29
BRCA1-218ENST00000489037 GIMAP4Q9NUV9 329 aa13.26□□□□□ -0.29
BRCA1-218ENST00000489037 SLC28A1O00337 649 aa13.25□□□□□ -0.29
BRCA1-218ENST00000489037 AZIN1O14977 448 aa13.25□□□□□ -0.29
BRCA1-218ENST00000489037 CTIFO43310 598 aaKnown RBP13.25□□□□□ -0.29
BRCA1-218ENST00000489037 RGS14O43566 566 aa13.25□□□□□ -0.29
BRCA1-218ENST00000489037 CPMP14384 443 aa13.25□□□□□ -0.29
BRCA1-218ENST00000489037 CSNK2A2P19784 350 aaPredicted RBP13.25□□□□□ -0.29
BRCA1-218ENST00000489037 SERPINB3P29508 390 aa13.25□□□□□ -0.29
BRCA1-218ENST00000489037 ALDH3A1P30838 453 aa13.25□□□□□ -0.29
BRCA1-218ENST00000489037 TIA1P31483 386 aaKnown RBP eCLIP13.25□□□□□ -0.29
BRCA1-218ENST00000489037 FOXA1P55317 472 aa13.25□□□□□ -0.29
BRCA1-218ENST00000489037 PMP22Q01453 160 aa13.25□□□□□ -0.29
BRCA1-218ENST00000489037 HEPACAMQ14CZ8 416 aa13.25□□□□□ -0.29
BRCA1-218ENST00000489037 MPEG1Q2M385 716 aa13.25□□□□□ -0.29
BRCA1-218ENST00000489037 CEP85LQ5SZL2 805 aa13.25□□□□□ -0.29
BRCA1-218ENST00000489037 ZNF324BQ6AW86 544 aaPredicted RBP13.25□□□□□ -0.29
BRCA1-218ENST00000489037 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.25□□□□□ -0.29
BRCA1-218ENST00000489037 GALNT12Q8IXK2 581 aa13.25□□□□□ -0.29
BRCA1-218ENST00000489037 SAMD14Q8IZD0 417 aaPredicted RBP13.25□□□□□ -0.29
BRCA1-218ENST00000489037 POGLUT1Q8NBL1 392 aa13.25□□□□□ -0.29
BRCA1-218ENST00000489037 PPP1R14CQ8TAE6 165 aa13.25□□□□□ -0.29
BRCA1-218ENST00000489037 UCN3Q969E3 161 aa13.25□□□□□ -0.29
BRCA1-218ENST00000489037 APIPQ96GX9 242 aa13.25□□□□□ -0.29
BRCA1-218ENST00000489037 GAL3ST4Q96RP7 486 aa13.25□□□□□ -0.29
BRCA1-218ENST00000489037 RASL10BQ96S79 203 aa13.25□□□□□ -0.29
BRCA1-218ENST00000489037 SLC17A7Q9P2U7 560 aa13.25□□□□□ -0.29
BRCA1-218ENST00000489037 SEC14L3Q9UDX4 400 aa13.25□□□□□ -0.29
BRCA1-218ENST00000489037 DLGAP4Q9Y2H0 992 aa13.25□□□□□ -0.29
BRCA1-218ENST00000489037 MYO7BQ6PIF6 2116 aa13.25□□□□□ -0.29
BRCA1-218ENST00000489037 ASPDHA6ND91 283 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 NPHS1O60500 1241 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 IGKV3-11P04433 115 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 IL3P08700 152 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 ANXA4P09525 319 aaPredicted RBP13.24□□□□□ -0.29
BRCA1-218ENST00000489037 SOX3P41225 446 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 SRSF11Q05519 484 aaKnown RBP13.24□□□□□ -0.29
BRCA1-218ENST00000489037 ZNF844Q08AG5 666 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 KRTCAP3Q53RY4 240 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 PIGGQ5H8A4 983 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 C16orf47Q6ZP98 133 aaPredicted RBP13.24□□□□□ -0.29
BRCA1-218ENST00000489037 DGAT2L6Q6ZPD8 337 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 RTL4Q6ZR62 310 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 TRIM46Q7Z4K8 759 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 SLC15A4Q8N697 577 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 FAM76AQ8TAV0 307 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 DOK4Q8TEW6 326 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 C16orf78Q8WTQ4 265 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 METTL2AQ96IZ6 378 aaKnown RBP13.24□□□□□ -0.29
BRCA1-218ENST00000489037 SGCZQ96LD1 299 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 BRINP2Q9C0B6 783 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 CXorf21Q9HAI6 301 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 SIRT5Q9NXA8 310 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 UTS2RQ9UKP6 389 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 ENTPD4Q9Y227 616 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 OSGIN2Q9Y236 505 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 CFL2Q9Y281 166 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 FIS1Q9Y3D6 152 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 NINQ8N4C6 2090 aa13.24□□□□□ -0.29
BRCA1-218ENST00000489037 FLNCQ14315 2725 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 C2orf92A0A1B0GVN3 265 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 TMEM200CA6NKL6 621 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 CAPN14A8MX76 684 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 HRKO00198 91 aa13.23□□□□□ -0.29
BRCA1-218ENST00000489037 PEX1O43933 1283 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms