RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 RPUSD3Q6P087 351 aaKnown RBP14.01□□□□□ -0.17
CXCL12-207ENST00000488591 TUBA3EQ6PEY2 450 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 SAMD14Q8IZD0 417 aaPredicted RBP14.01□□□□□ -0.17
CXCL12-207ENST00000488591 KIRREL3Q8IZU9 778 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 ARMC10Q8N2F6 343 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 ZNF721Q8TF20 911 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 TLCD1Q96CP7 247 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 C11orf24Q96F05 449 aaPredicted RBP14.01□□□□□ -0.17
CXCL12-207ENST00000488591 FBXL20Q96IG2 436 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 NPAS2Q99743 824 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 CNPPD1Q9BV87 410 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 TRIM4Q9C037 500 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 GIMAP4Q9NUV9 329 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 ZDHHC2Q9UIJ5 367 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 ZNF223Q9UK11 482 aaPredicted RBP14.01□□□□□ -0.17
CXCL12-207ENST00000488591 UTS2RQ9UKP6 389 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 CES1P1Q9UKY3 287 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 YARS2Q9Y2Z4 477 aaKnown RBP14.01□□□□□ -0.17
CXCL12-207ENST00000488591 COPG1Q9Y678 874 aaKnown RBP14.01□□□□□ -0.17
CXCL12-207ENST00000488591 CNTRLQ7Z7A1 2325 aa14.01□□□□□ -0.17
CXCL12-207ENST00000488591 TMEM233B4DJY2 109 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 NPIPB8E9PQR5 432 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 PIP5K1BO14986 540 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 ITGA10O75578 1167 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 CD46P15529 392 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 H2AFXP16104 143 aaPredicted RBP14□□□□□ -0.17
CXCL12-207ENST00000488591 BGNP21810 368 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 SLC1A6P48664 564 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 CYB561P49447 251 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 SSR4P51571 173 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 ERVK-8P63133 956 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 RNF4P78317 190 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 C2orf80Q0P641 193 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 OR1C1Q15619 314 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 UGT3A2Q3SY77 523 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 DGAT2L6Q6ZPD8 337 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 Q6ZSR9 355 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 ATCAYQ86WG3 371 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 GALNT12Q8IXK2 581 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 CISD2Q8N5K1 135 aaKnown RBP14□□□□□ -0.17
CXCL12-207ENST00000488591 TMEM156Q8N614 296 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 CDC26Q8NHZ8 85 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 MGARPQ8TDB4 240 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 C5orf34Q96MH7 638 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 TUBB1Q9H4B7 451 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 VIPAS39Q9H9C1 493 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 CXorf21Q9HAI6 301 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 AGPAT4Q9NRZ5 378 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 ANKRD10Q9NXR5 420 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 EHD3Q9NZN3 535 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 LRFN1Q9P244 771 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 MYOTQ9UBF9 498 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 HEY2Q9UBP5 337 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 ERVK-19Q9WJR5 959 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 EPB41L3Q9Y2J2 1087 aaPredicted RBP14□□□□□ -0.17
CXCL12-207ENST00000488591 TMED5Q9Y3A6 229 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 CCL27Q9Y4X3 112 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 POLR3HQ9Y535 204 aaPredicted RBP14□□□□□ -0.17
CXCL12-207ENST00000488591 PTGDR2Q9Y5Y4 395 aa14□□□□□ -0.17
CXCL12-207ENST00000488591 VPS4BO75351 444 aa13.99□□□□□ -0.17
CXCL12-207ENST00000488591 TRHRP34981 398 aaPredicted RBP13.99□□□□□ -0.17
CXCL12-207ENST00000488591 FEN1P39748 380 aaKnown RBP13.99□□□□□ -0.17
CXCL12-207ENST00000488591 HLCSP50747 726 aa13.99□□□□□ -0.17
CXCL12-207ENST00000488591 INAQ16352 499 aa13.99□□□□□ -0.17
CXCL12-207ENST00000488591 GALNTL6Q49A17 601 aa13.99□□□□□ -0.17
CXCL12-207ENST00000488591 ZNF766Q5HY98 468 aa13.99□□□□□ -0.17
CXCL12-207ENST00000488591 RNF111Q6ZNA4 994 aa13.99□□□□□ -0.17
CXCL12-207ENST00000488591 IKBIPQ70UQ0 350 aa13.99□□□□□ -0.17
CXCL12-207ENST00000488591 SLC29A4Q7RTT9 530 aa13.99□□□□□ -0.17
CXCL12-207ENST00000488591 TRIM42Q8IWZ5 723 aa13.99□□□□□ -0.17
CXCL12-207ENST00000488591 MMP21Q8N119 569 aa13.99□□□□□ -0.17
CXCL12-207ENST00000488591 LRRC25Q8N386 305 aaPredicted RBP13.99□□□□□ -0.17
CXCL12-207ENST00000488591 ZNF321PQ8N8H1 164 aa13.99□□□□□ -0.17
CXCL12-207ENST00000488591 ASB15Q8WXK1 588 aa13.99□□□□□ -0.17
CXCL12-207ENST00000488591 TMEM125Q96AQ2 219 aa13.99□□□□□ -0.17
CXCL12-207ENST00000488591 SNRNP40Q96DI7 357 aaKnown RBP13.99□□□□□ -0.17
CXCL12-207ENST00000488591 PPP3R2Q96LZ3 170 aa13.99□□□□□ -0.17
CXCL12-207ENST00000488591 MYNNQ9NPC7 610 aa13.99□□□□□ -0.17
CXCL12-207ENST00000488591 MIEF1Q9NQG6 463 aa13.99□□□□□ -0.17
CXCL12-207ENST00000488591 VPS4AQ9UN37 437 aa13.99□□□□□ -0.17
CXCL12-207ENST00000488591 ENTPD4Q9Y227 616 aa13.99□□□□□ -0.17
CXCL12-207ENST00000488591 RAP2CQ9Y3L5 183 aa13.99□□□□□ -0.17
CXCL12-207ENST00000488591 PCDHGB6Q9Y5F9 930 aa13.99□□□□□ -0.17
CXCL12-207ENST00000488591 A0A1W2PS29 197 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 OR6C76A6NM76 312 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 HRKO00198 91 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 WWP2O00308 870 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 LSM1O15116 133 aaKnown RBP13.98□□□□□ -0.17
CXCL12-207ENST00000488591 ITM2AO43736 263 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 PRKNO60260 465 aaPredicted RBP13.98□□□□□ -0.17
CXCL12-207ENST00000488591 LYPLA1O75608 230 aaPredicted RBP13.98□□□□□ -0.17
CXCL12-207ENST00000488591 OR2J2O76002 312 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 IGKV3-11P04433 115 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 ATP1B1P05026 303 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 DDCP20711 480 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 MAPK1P28482 360 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 ARRB2P32121 409 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 RPL14P50914 215 aaKnown RBP13.98□□□□□ -0.17
CXCL12-207ENST00000488591 HK2P52789 917 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 RPL38P63173 70 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms