RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 SPIDRQ14159 915 aa11.5□□□□□ -0.57
HDAC6-230ENST00000488543 COX20Q5RI15 118 aa11.5□□□□□ -0.57
HDAC6-230ENST00000488543 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.5□□□□□ -0.57
HDAC6-230ENST00000488543 ERICH5Q6P6B1 374 aa11.5□□□□□ -0.57
HDAC6-230ENST00000488543 C16orf87Q6PH81 154 aa11.5□□□□□ -0.57
HDAC6-230ENST00000488543 THAP5Q7Z6K1 395 aa11.5□□□□□ -0.57
HDAC6-230ENST00000488543 C8orf59Q8N0T1 100 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-230ENST00000488543 SPARTQ8N0X7 666 aa11.5□□□□□ -0.57
HDAC6-230ENST00000488543 OR2L5Q8NG80 312 aa11.5□□□□□ -0.57
HDAC6-230ENST00000488543 ZC3H10Q96K80 434 aaKnown RBP11.5□□□□□ -0.57
HDAC6-230ENST00000488543 SLC35A5Q9BS91 424 aa11.5□□□□□ -0.57
HDAC6-230ENST00000488543 SPATA9Q9BWV2 254 aa11.5□□□□□ -0.57
HDAC6-230ENST00000488543 EPS8L2Q9H6S3 715 aa11.5□□□□□ -0.57
HDAC6-230ENST00000488543 ZSCAN32Q9NX65 697 aa11.5□□□□□ -0.57
HDAC6-230ENST00000488543 TAS2R9Q9NYW1 312 aa11.5□□□□□ -0.57
HDAC6-230ENST00000488543 C5AR2Q9P296 337 aa11.5□□□□□ -0.57
HDAC6-230ENST00000488543 FBXO9Q9UK97 447 aaPredicted RBP11.5□□□□□ -0.57
HDAC6-230ENST00000488543 ACSL6Q9UKU0 697 aa11.5□□□□□ -0.57
HDAC6-230ENST00000488543 KLK4Q9Y5K2 254 aa11.5□□□□□ -0.57
HDAC6-230ENST00000488543 CACNA1HO95180 2353 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 CTSVO60911 334 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 INHBBP09529 407 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 IL1RNP18510 177 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 ATP5A1P25705 553 aaKnown RBP11.49□□□□□ -0.57
HDAC6-230ENST00000488543 ALDH9A1P49189 494 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 ARFIP1P53367 373 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 PCBP4P57723 403 aaKnown RBP11.49□□□□□ -0.57
HDAC6-230ENST00000488543 HEPACAMQ14CZ8 416 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 HLA-BQ31612 363 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 BROXQ5VW32 411 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 LAIR1Q6GTX8 287 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 FIGLAQ6QHK4 219 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 DGLUCYQ7Z3D6 616 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 ZNF554Q86TJ5 538 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 ZBTB44Q8NCP5 570 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 OR8K5Q8NH50 307 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 NT5CQ8TCD5 201 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 TMEM121BQ9BXQ6 578 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-230ENST00000488543 UGT2B28Q9BY64 529 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 CXorf36Q9H7Y0 433 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 C11orf16Q9NQ32 467 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 RYDENQ9NUL5 291 aaKnown RBP11.49□□□□□ -0.57
HDAC6-230ENST00000488543 FAIMQ9NVQ4 179 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 PILRAQ9UKJ1 303 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 ASB4Q9Y574 426 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 ADAMTS9Q9P2N4 1935 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 H0YAE9 185 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 NOL3O60936 208 aaKnown RBP11.49□□□□□ -0.57
HDAC6-230ENST00000488543 TNFRSF21O75509 655 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 SEC14L2O76054 403 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 NTRK1P04629 796 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 HIST1H1TP22492 207 aaPredicted RBP11.49□□□□□ -0.57
HDAC6-230ENST00000488543 FMO3P31513 532 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 MAP2K4P45985 399 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 CD300CQ08708 224 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 VAC14Q08AM6 782 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 SLC5A12Q1EHB4 618 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 ACOT4Q8N9L9 421 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 OR52N2Q8NGI0 321 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 TM4SF19Q96DZ7 209 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 KCNC2Q96PR1 638 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 OR2A5Q96R48 311 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 FUNDC2Q9BWH2 189 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 ERVMER34-1Q9H9K5 563 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 ANKMY1Q9P2S6 941 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 CORO2BQ9UQ03 480 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 PCDHGA2Q9Y5H1 932 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 CFAP54Q96N23 3096 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 PCDH15Q96QU1 1955 aa11.49□□□□□ -0.57
HDAC6-230ENST00000488543 WDFY3Q8IZQ1 3526 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 PDPK1O15530 556 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 P2RX6O15547 441 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 ABCB7O75027 752 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 PRKRAO75569 313 aaKnown RBP11.48□□□□□ -0.57
HDAC6-230ENST00000488543 ARRB1P49407 418 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-230ENST00000488543 PPP2R2BQ00005 443 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 SLAMF1Q13291 335 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 NR1D2Q14995 579 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 C6orf141Q5SZD1 244 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-230ENST00000488543 NKAIN2Q5VXU1 208 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 BMP8AQ7Z5Y6 402 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 ASPGQ86U10 573 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 ZCCHC7Q8N3Z6 543 aaKnown RBP11.48□□□□□ -0.57
HDAC6-230ENST00000488543 KCT2Q8NC54 265 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 OR5AK3PQ8NH89 298 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 ZNF420Q8TAQ5 688 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-230ENST00000488543 OR5P2Q8WZ92 322 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 OSBPL10Q9BXB5 764 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 ASPSCR1Q9BZE9 553 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 MAGIXQ9H6Y5 334 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 TBC1D23Q9NUY8 699 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 TAS2R7Q9NYW3 318 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 ENTPD2Q9Y5L3 495 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 R4GN57 208 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 A0A1W2PR48 441 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 WASHC1A8K0Z3 465 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 C2orf74A8MZ97 194 aa11.48□□□□□ -0.57
HDAC6-230ENST00000488543 ZNF701M0R085 212 aaPredicted RBP11.48□□□□□ -0.57
HDAC6-230ENST00000488543 GCM2O75603 506 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms