RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 SLC35E2P0CK97 266 aa16.42■□□□□ 0.22
ITGB1-215ENST00000488494 MYL2P10916 166 aa16.42■□□□□ 0.22
ITGB1-215ENST00000488494 ABOP16442 354 aa16.42■□□□□ 0.22
ITGB1-215ENST00000488494 KRT15P19012 456 aa16.42■□□□□ 0.22
ITGB1-215ENST00000488494 PIK3R1P27986 724 aa16.42■□□□□ 0.22
ITGB1-215ENST00000488494 KRT6CP48668 564 aa16.42■□□□□ 0.22
ITGB1-215ENST00000488494 HTR6P50406 440 aa16.42■□□□□ 0.22
ITGB1-215ENST00000488494 TBL3Q12788 808 aaKnown RBP16.42■□□□□ 0.22
ITGB1-215ENST00000488494 CSTF3Q12996 717 aaKnown RBP16.42■□□□□ 0.22
ITGB1-215ENST00000488494 OPN5Q6U736 354 aa16.42■□□□□ 0.22
ITGB1-215ENST00000488494 GALNT12Q8IXK2 581 aa16.42■□□□□ 0.22
ITGB1-215ENST00000488494 MMP21Q8N119 569 aa16.42■□□□□ 0.22
ITGB1-215ENST00000488494 C1orf52Q8N6N3 182 aaKnown RBP16.42■□□□□ 0.22
ITGB1-215ENST00000488494 CCNYL1Q8N7R7 359 aa16.42■□□□□ 0.22
ITGB1-215ENST00000488494 SLC22A8Q8TCC7 542 aa16.42■□□□□ 0.22
ITGB1-215ENST00000488494 CCDC120Q96HB5 630 aa16.42■□□□□ 0.22
ITGB1-215ENST00000488494 PPCSQ9HAB8 311 aa16.42■□□□□ 0.22
ITGB1-215ENST00000488494 DCDC2Q9UHG0 476 aa16.42■□□□□ 0.22
ITGB1-215ENST00000488494 ZNF835Q9Y2P0 537 aa16.42■□□□□ 0.22
ITGB1-215ENST00000488494 TEX15Q9BXT5 2789 aa16.42■□□□□ 0.22
ITGB1-215ENST00000488494 NBPF19A0A087WUL8 3843 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 FAM166BA8MTA8 275 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 HS6ST1O60243 411 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 PROCP04070 461 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 CLPSP04118 112 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 ENO1P06733 434 aaKnown RBP16.41■□□□□ 0.22
ITGB1-215ENST00000488494 HSD3B1P14060 373 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 HSD3B2P26439 372 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 HMOX2P30519 316 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 GALNSP34059 522 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 SLC37A1P57057 533 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 EBPQ15125 230 aaKnown RBP16.41■□□□□ 0.22
ITGB1-215ENST00000488494 MPEG1Q2M385 716 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 ZNF750Q32MQ0 723 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 CMPK2Q5EBM0 449 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 ZYG11AQ6WRX3 759 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 Q6ZPB1 254 aaPredicted RBP16.41■□□□□ 0.22
ITGB1-215ENST00000488494 SLC29A4Q7RTT9 530 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 TDRPQ86YL5 185 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 SPPL2CQ8IUH8 684 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 CHERPQ8IWX8 916 aaKnown RBP16.41■□□□□ 0.22
ITGB1-215ENST00000488494 GOLM1Q8NBJ4 401 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 OR2M7Q8NG81 312 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 OR4K14Q8NGD5 310 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 METTL6Q8TCB7 284 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.41■□□□□ 0.224e-6■■■■□ 21.6
ITGB1-215ENST00000488494 KCNA7Q96RP8 456 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 ACPTQ9BZG2 426 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 WWTR1Q9GZV5 400 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 GSTO2Q9H4Y5 243 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 CXorf21Q9HAI6 301 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 NMRK1Q9NWW6 199 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 VPS29Q9UBQ0 182 aa16.41■□□□□ 0.22
ITGB1-215ENST00000488494 DIDO1Q9BTC0 2240 aaKnown RBP16.4■□□□□ 0.22
ITGB1-215ENST00000488494 G3V2L1 256 aa16.4■□□□□ 0.22
ITGB1-215ENST00000488494 CDC40O60508 579 aaKnown RBP eCLIP16.4■□□□□ 0.22
ITGB1-215ENST00000488494 GUCY1B2O75343 617 aa16.4■□□□□ 0.22
ITGB1-215ENST00000488494 NADKO95544 446 aaPredicted RBP16.4■□□□□ 0.22
ITGB1-215ENST00000488494 CCL3P10147 92 aa16.4■□□□□ 0.22
ITGB1-215ENST00000488494 CHN1P15882 459 aa16.4■□□□□ 0.22
ITGB1-215ENST00000488494 SSTR4P31391 388 aa16.4■□□□□ 0.22
ITGB1-215ENST00000488494 DCTP40126 519 aa16.4■□□□□ 0.22
ITGB1-215ENST00000488494 PKNOX1P55347 436 aa16.4■□□□□ 0.22
ITGB1-215ENST00000488494 PLGLB1Q02325 96 aa16.4■□□□□ 0.22
ITGB1-215ENST00000488494 PIGGQ5H8A4 983 aa16.4■□□□□ 0.22
ITGB1-215ENST00000488494 C6orf163Q5TEZ5 329 aa16.4■□□□□ 0.22
ITGB1-215ENST00000488494 ZNF787Q6DD87 383 aa16.4■□□□□ 0.22
ITGB1-215ENST00000488494 SLC48A1Q6P1K1 146 aa16.4■□□□□ 0.22
ITGB1-215ENST00000488494 MTFR2Q6P444 385 aa16.4■□□□□ 0.22
ITGB1-215ENST00000488494 GK5Q6ZS86 529 aa16.4■□□□□ 0.22
ITGB1-215ENST00000488494 SH2D5Q6ZV89 423 aa16.4■□□□□ 0.22
ITGB1-215ENST00000488494 FGD2Q7Z6J4 655 aa16.4■□□□□ 0.22
ITGB1-215ENST00000488494 C16orf52Q8NHV5 167 aa16.4■□□□□ 0.22
ITGB1-215ENST00000488494 AGAP11Q8TF27 550 aa16.4■□□□□ 0.22
ITGB1-215ENST00000488494 ITLN2Q8WWU7 325 aaPredicted RBP16.4■□□□□ 0.22
ITGB1-215ENST00000488494 SPACA9Q96E40 222 aaPredicted RBP16.4■□□□□ 0.22
ITGB1-215ENST00000488494 PCDHA9Q9Y5H5 950 aa16.4■□□□□ 0.22
ITGB1-215ENST00000488494 C1orf226A1L170 272 aa16.39■□□□□ 0.21
ITGB1-215ENST00000488494 OR6C76A6NM76 312 aa16.39■□□□□ 0.21
ITGB1-215ENST00000488494 ACOT7O00154 380 aa16.39■□□□□ 0.21
ITGB1-215ENST00000488494 PLIN3O60664 434 aa16.39■□□□□ 0.21
ITGB1-215ENST00000488494 ULK1O75385 1050 aa16.39■□□□□ 0.21
ITGB1-215ENST00000488494 ESRRBO95718 433 aa16.39■□□□□ 0.21
ITGB1-215ENST00000488494 CT62P0C5K7 136 aa16.39■□□□□ 0.21
ITGB1-215ENST00000488494 CPMP14384 443 aa16.39■□□□□ 0.21
ITGB1-215ENST00000488494 NT5EP21589 574 aa16.39■□□□□ 0.21
ITGB1-215ENST00000488494 ALDH9A1P49189 494 aa16.39■□□□□ 0.21
ITGB1-215ENST00000488494 XKP51811 444 aa16.39■□□□□ 0.21
ITGB1-215ENST00000488494 VSNL1P62760 191 aa16.39■□□□□ 0.21
ITGB1-215ENST00000488494 HMGCS1Q01581 520 aa16.39■□□□□ 0.21
ITGB1-215ENST00000488494 ZNF791Q3KP31 576 aaPredicted RBP16.39■□□□□ 0.21
ITGB1-215ENST00000488494 LYPD8Q6UX82 237 aa16.39■□□□□ 0.21
ITGB1-215ENST00000488494 BNC2Q6ZN30 1099 aaPredicted RBP16.39■□□□□ 0.21
ITGB1-215ENST00000488494 FAM47EQ6ZV65 393 aa16.39■□□□□ 0.21
ITGB1-215ENST00000488494 C4orf33Q8N1A6 199 aa16.39■□□□□ 0.21
ITGB1-215ENST00000488494 KLHL29Q96CT2 875 aa16.39■□□□□ 0.21
ITGB1-215ENST00000488494 CCDC126Q96EE4 140 aa16.39■□□□□ 0.21
ITGB1-215ENST00000488494 SGCZQ96LD1 299 aa16.39■□□□□ 0.21
ITGB1-215ENST00000488494 FAM173AQ9BQD7 235 aa16.39■□□□□ 0.21
ITGB1-215ENST00000488494 TTTY12Q9BZ98 90 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms